Scytonema sp. HK-05: SAMD_80540 Help Entry SAMD_80540        CDS       T09974                                  Name (GenBank) WD-40 repeat-containing protein Organism scyt  Scytonema sp. HK-05 SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_TEP1_C NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Ge1_WD40 RMC1_N Beta-prop_SPT8 Beta-prop_HPS5 WD_LRWD1 WD40_like Beta-prop_DCAF12 eIF2A Beta-prop_Vps41 Beta-prop_WDR35_TULP_N NB-ARC Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_NWD2_C Beta-prop_Nup120_160 PEP5_VPS11_N Beta-prop_VPS8 WDR54 NACHT KNTC1_N AAA_16 Pentapeptide AAA_22 nSTAND3 AAA DUF5570 nSTAND1 ATPase_2 HTH_3 Pentapeptide_4 LacI HTH_31 Beta-prop_WDR11_2nd Motif Other DBs NCBI-ProteinID:  BAY50425 LinkDB All DBs Position plasmid1:647609..651187 Genome browser AA seq 1192 aa AA seqDB search MNRHNPKRSRGVILTLSGWEKLQKGKLEWEFREKSGSKYTLEEISERAGLTPNTVAKVLT RSEGVDKQTLVRLFLAFNLELSKSDYTKSDPNWASFQALKTPKLIDWEEEVCVLVFYGRT TELALLEQWLILDHCRVVALLGMGGIGKTSLAAKLVHEIQGQFEYVIWRSLYNVPPLLDL LANLIQFFSNEKILEADLPNSADGRISQLIDYLRQHRCLIILDNADTILQSGAIAGSYRE EYSDYGQLIKRVGQAFHTSCLLLTSREKPKDVASLEGEALPVRSLQLRGLSEEEAKRIFH SKGLSVEDSKNKALLKRYSGNPLALKIVATTIQDVFNGNISEFLNQNIAVFGDIYALLEE QFERLSDLEREVMYWLAINREPITLSQLREDIVSPGTPHRLVEALESLVRRSLIHKATPT QVEKSAPLFTLEPVLIEYVTNKLIKQVCEEIATGESVFLRYYALSKGQSKEYTRVAQIDF ILKPIIDELLTIFKTQKKLEEQLTQILAKLQEESPQEPGYTGGNIFNLFCQLKANLRGYD FSNLSVWQADLRFVNLSEVNFQNANLSKSVFTKNFSRISAVAFNPNGKSLATSDANGKIC LWRDFADSEELLTYLGHISWVRAIAFSPDGSTISSVGADQNVKLWDTSSGECLKTLSEHP KRVQAVAFSPKGNLLTCGSDDQTVSLWNVTSSKSQKILHEHTGRVLSVAFDPQGKTLASA SSDKTVKLWNISTGQCYNVFKGHIGWVWSVTFSPDGKTLASGSDDQSVKLWDTSTDKCLR TLRGHSNRVRSVTFAPKDKILASGSDDQTVKLWDASSGECLRTLQGHTDRIWSVAFSPEG NILASGSDDQTVRLWDVSTGQVIKILQGYSNGVMSVAFAPGGKTFVSSSDDQTVRCWDVS TGQCNKTFQGHTNRVRTVAFSPQGNILATGSYDQVVKLWDTSTNQCCKILQGHIGWVKAV AFAPGGNILASGSDDQTVRLWDVSTGEVLRTLEHSHGVWSVAFSPEGAMLASGSDDQTVS LWNVSTGQVLKTLSGHSGWVLSVAFSPEGRTLASGSKDKTVKLWDVSTNQCFKTFLGHTS WVLSVAFSPQGNILASGSVDQMVKLWDISTGQCIKTLQGHTHWVRSVAFCPDGHTLLSGS EDGTIKLWDVLIGECLKTFRNERPYEGMNISGVTGLTEATIASLKALGAMTN NT seq 3579 nt NT seq  +upstreamnt  +downstreamnt atgaatcggcacaatccaaaacggagtcgtggcgttatacttactctctcaggctgggaa aagcttcagaagggaaaactcgaatgggaatttcgcgaaaaatctggttctaagtacacc ttagaagaaataagtgaacgcgctggattaactccgaatacagtggcgaaggtactgact cgctctgaaggggttgacaaacaaacgcttgttcgtttgtttctcgcgtttaatttagaa ttgagtaaaagcgactatacaaagagcgatcccaattgggcaagttttcaagccttgaag actcccaagctcattgattgggaagaagaagtttgtgtgttagttttttatggacgcaca acagaactggctctcttggagcaatggctcatcctggatcactgtcgagttgtagcgctg ttgggaatggggggcattggtaaaacctctcttgctgccaagctagtccatgaaattcag gggcaatttgagtatgttatttggcgatcgctctacaatgtccccccacttctcgacctc ctcgctaacttgattcaatttttctctaacgaaaaaattttagaagctgacttaccaaat agcgcagacggcagaatctcgcaactgattgattatttgcgacaacaccgctgtctcatt atactcgacaacgctgataccattctgcaaagtggtgctattgctggaagctatcgagaa gaatattcggattatggtcaactcataaaacgggtgggacaagcgtttcatactagctgc ttactgctgacttctcgggaaaaaccgaaagacgtagcgtcactcgaaggagaagcacta cctgttcgctcattacaactgagaggtctctctgaggaggaagcaaaaagaatttttcac tccaaaggtctgtcggtcgaagattccaaaaataaagcacttctaaagcgctattctggc aatccactagctttgaagatagttgcgacgaccattcaagatgtctttaatggtaatatt tctgaatttttaaaccaaaacatcgcagtttttggtgatatttacgctcttttagaggag cagtttgagcgcttgtcggatttagagcgtgaagttatgtactggctggcaattaatcgt gagccgattacgctctcccaattgcgagaagatattgtatcaccaggaacaccacacaga ttagtagaggctttggagtctctggtccggagaagtctcatccacaaagctacgcctaca caagtagagaaaagcgccccactctttacactagaacctgtattaatagaatatgtgact aacaaattaataaagcaagtttgtgaagagattgccactggggaaagtgtgtttcttagg tattatgctttgagcaagggtcagtctaaagaatacactagagttgctcaaatagatttt atcctcaagccaattattgatgaactgcttactatctttaaaacgcaaaaaaaacttgaa gaacagctaactcaaattttagcaaaactgcaagaagaatctccgcaggaacctggctat acaggtgggaatatttttaacctgttttgtcagctaaaggctaatttaagagggtatgat ttttctaacctgagcgtttggcaagcagatctgcgctttgtaaatttatctgaagttaat ttccaaaacgcgaatttatccaagtcggtttttactaaaaacttcagcagaatttctgcc gtagcattcaatcccaatggaaaaagtttggcgacgagtgacgctaatggtaagatttgc ttgtggcgagattttgctgatagtgaagaacttttgacatatcttggacacatcagttgg gttcgagcgatcgccttcagtccggatggcagtaccatcagtagcgtgggtgctgaccag aatgtgaagttgtgggacacaagcagcggtgagtgcctaaaaactttgagcgaacaccct aagcgtgtacaagccgttgcctttagtcctaaaggtaatcttctaacttgtggtagcgat gaccaaacagtgagtttgtggaatgtcaccagcagtaaatctcagaaaattttgcacgaa catactggtcgcgtactgtcagttgcttttgatcctcaaggtaagaccctagccagtgct agtagtgacaaaaccgtgaagctatggaatattagcacgggtcaatgctacaatgttttc aagggacatattggttgggtttggtcagtaaccttcagtcccgatggcaaaaccctagct agtggcagtgacgaccaaagtgtgaagctttgggatactagcaccgataaatgccttaga actttgcggggacatagtaaccgggtaaggtcagtcacttttgctcctaaagataaaatt ctggctagcggtagtgatgaccaaactgtgaagctttgggatgccagcagtggtgaatgc cttagaactttgcagggacatactgatagaatctggtcagttgctttcagtcctgaaggt aatatccttgctagtggcagtgatgaccaaactgtaaggctttgggatgtcagcactggt caggtcataaaaatcttgcaaggatacagtaatggggtaatgtctgttgcctttgctccc ggaggtaaaacttttgtcagcagcagtgacgaccaaactgtacgctgttgggatgtcagc actggtcagtgtaacaaaactttccagggacacactaaccgagtacgaaccgttgctttc agtcctcaaggtaatatcttggccactggcagttacgaccaggtagtgaagttgtgggat accagcaccaaccaatgctgtaaaattttgcaaggacatatcggttgggtaaaagcagtc gcctttgctcctggaggtaatatcctcgctagtggcagtgatgaccaaactgtgagatta tgggatgtgagcactggtgaagtcttaagaaccttggaacatagtcatggagtatggtct gttgcctttagtcctgaaggtgcgatgctggctagtggcagtgatgaccaaactgtgagt ttgtggaatgtcagcacaggtcaagttttgaaaaccttatcgggacatagcggttgggta ttgtcagttgctttcagtcctgaaggtaggactctagccagtggcagtaaagataaaaca gtgaagttatgggatgtcagcactaaccaatgtttcaaaactttcttaggacatacgagt tgggtattgtcagttgcctttagtcctcaaggtaatatcctagcgagtggtagcgtagac caaatggtaaaattgtgggatattagcacaggtcaatgtatcaaaactttacagggtcat acccactgggtaaggtcagttgctttttgtccggatggtcacactttacttagtggcagt gaagatgggacaattaagttatgggatgttttaatcggtgagtgcctcaaaactttcaga aacgaaagaccttatgagggaatgaacatttctggcgtaacaggtttaactgaagcgact attgcttctctaaaagctctaggcgctatgactaactag

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