KEGG   Streptomyces sp. CFMR 7: ABE83_17480
Entry
ABE83_17480       CDS       T04074                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
scz  Streptomyces sp. CFMR 7
Brite
KEGG Orthology (KO) [BR:scz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scz03021]
    ABE83_17480
Transcription machinery [BR:scz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ABE83_17480
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_3 HTH_Crp_2 HTH_24 Sigma70_ECF PF0610-like_N MarR DUF7343 KORA DUF134
Other DBs
NCBI-ProteinID: ALC28685
LinkDB
Position
4180430..4181296
AA seq 288 aa
MSEEQGSSKVLTLTKSVPAPAVLTSSPEAIDTRTLSRSLFLRLAALGPASGPDGTDSPER
TYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAM
PTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKTSDELAQKLDRSPTVPELARALGVSEE
DVVDGLAVGNAYTASSLDSPSPEDDGGEGSLADRLGYEDAALEGVEYRESLKPLLAKLAP
RERQIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLISD
NT seq 867 nt   +upstreamnt  +downstreamnt
atgtccgaagaacagggcagctcgaaggtgctcacgctcaccaagagcgtgccggcaccc
gccgtgctcaccagctcgccggaagccatcgacacccgcactctgtcccgctccctgttc
ctgcggctcgccgcgctcggccccgcctcgggtcccgacggaacggacagtccggagcgg
acctatgtgcgggacacactcatcgagctgaacctcccgctggtgcggtacgccgcggcg
cggttccgtagccgcaacgaaccgatggaggacatcgtccaggtcggcaccatcggcctg
atcaaggcgatcgaccggttcgactgcgaacggggcgtggagttcccgaccttcgcgatg
ccgaccgtcgtcggggagatcaaacgcttcttccgcgacacctcctggtccgtccgggtt
ccccggcgcctccaggagctgcggctcgcgctgacgaagaccagcgacgagctggcccag
aagctcgaccgctccccgaccgtgcccgagctggcccgggccctcggcgtctccgaggag
gacgtggtcgacggcctcgccgtcggcaacgcgtacaccgcctcctccctcgactccccc
tcccccgaggacgacggcggcgagggctccctcgcggaccgcctcggctacgaggacgcg
gcgctggagggcgtcgagtaccgggagtcgctgaagcccctgctggccaaactcgccccg
cgcgagcggcagatcatcatgctgcggttcttcgccaacatgacccagtcgcagatcggc
gaggaggtcggcatctcccagatgcacgtctcccggctgctcacccgcaccctcgcccag
ctccgggaagggctcatctccgactga

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