Streptomyces sp. CFMR 7: ABE83_23235
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Entry
ABE83_23235 CDS
T04074
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
scz
Streptomyces sp. CFMR 7
Brite
KEGG Orthology (KO) [BR:
scz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scz03032
]
ABE83_23235
03036 Chromosome and associated proteins [BR:
scz03036
]
ABE83_23235
03400 DNA repair and recombination proteins [BR:
scz03400
]
ABE83_23235
DNA replication proteins [BR:
scz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ABE83_23235
Chromosome and associated proteins [BR:
scz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ABE83_23235
DNA repair and recombination proteins [BR:
scz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ABE83_23235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Urease_beta
A_thal_3526
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
ALC29648
UniProt:
A0A0M5IXF7
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All DBs
Position
5538176..5538457
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AA seq
93 aa
AA seq
DB search
MNRSELVAALADRAEVTRKDADAVLAALAETVGEIVAKGDEKVTIPGFLTFERTHRAART
ARNPQTGDPINIPAGYSVKVSAGSKLKEAAKGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcagtgagctggtggccgccctggccgaccgtgccgaggtgacccgcaaggac
gccgacgccgtgctggccgcgctcgccgagaccgtcggtgagatcgtcgccaagggcgac
gagaaggtcaccatccccggcttcctgaccttcgagcgcacccaccgtgccgctcgcacc
gcgcgcaacccgcagaccggcgacccgatcaacatccccgccggctacagcgtgaaggtc
tccgcgggctcgaagctcaaggaagccgccaagggcaagtaa
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