KEGG   Streptomyces sp. CFMR 7: ABE83_23235
Entry
ABE83_23235       CDS       T04074                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
scz  Streptomyces sp. CFMR 7
Brite
KEGG Orthology (KO) [BR:scz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scz03032]
    ABE83_23235
   03036 Chromosome and associated proteins [BR:scz03036]
    ABE83_23235
   03400 DNA repair and recombination proteins [BR:scz03400]
    ABE83_23235
DNA replication proteins [BR:scz03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    ABE83_23235
Chromosome and associated proteins [BR:scz03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    ABE83_23235
DNA repair and recombination proteins [BR:scz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      ABE83_23235
SSDB
Motif
Pfam: Bac_DNA_binding Urease_beta A_thal_3526 HU-HIG
Other DBs
NCBI-ProteinID: ALC29648
UniProt: A0A0M5IXF7
LinkDB
Position
5538176..5538457
AA seq 93 aa
MNRSELVAALADRAEVTRKDADAVLAALAETVGEIVAKGDEKVTIPGFLTFERTHRAART
ARNPQTGDPINIPAGYSVKVSAGSKLKEAAKGK
NT seq 282 nt   +upstreamnt  +downstreamnt
atgaaccgcagtgagctggtggccgccctggccgaccgtgccgaggtgacccgcaaggac
gccgacgccgtgctggccgcgctcgccgagaccgtcggtgagatcgtcgccaagggcgac
gagaaggtcaccatccccggcttcctgaccttcgagcgcacccaccgtgccgctcgcacc
gcgcgcaacccgcagaccggcgacccgatcaacatccccgccggctacagcgtgaaggtc
tccgcgggctcgaagctcaaggaagccgccaagggcaagtaa

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