KEGG   Streptomyces sp. CFMR 7: ABE83_24555
Entry
ABE83_24555       CDS       T04074                                 
Name
(GenBank) helicase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
scz  Streptomyces sp. CFMR 7
Pathway
scz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:scz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    ABE83_24555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scz03400]
    ABE83_24555
Enzymes [BR:scz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     ABE83_24555
DNA repair and recombination proteins [BR:scz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     ABE83_24555
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_RecD2 OB_YrrC UvrD_C_2 SH3_13 Viral_helicase1 HHH_5 AAA_11 AAA_22 PIF1 Helicase_RecD TraI_hel_assoc_N PhoH NPHP3_N AAA_16 UvrD_C Herpes_Helicase nSTAND3 DEAD UvrD-helicase AAA TrwB_AAD_bind SLFN-g3_helicase DUF87 ABC_tran AAA_28 HTH_IclR ATPase_2
Other DBs
NCBI-ProteinID: ALC29868
UniProt: A0A0M5J525
LinkDB
Position
5862549..5864774
AA seq 741 aa
MSNMAVVEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGSLLGAQVGESLRMEGRWG
SHSQYGKQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPVMADRITTHFGVDTLDIIENA
PKRLVEVPGLGPKRTKMIAAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYEDASISVV
KNQPYRLAADVWGIGFLTADKIAQAVGIPHDSPERVKAGLQYALSQSSDQGHCFLPEERL
IADGVKLLQVDTGLVIECLAELAADPEGVVREKVPSPEGGEPITAVYLIPFHRAELSLAG
QVRRLLNTAEDRMPAFQDVDWKKALAWLATRTGADLAPEQEEAVRLALSRKVAVLTGGPG
CGKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLSELTGAEASTVHRLLELKPGGDAAYD
RDRPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLSDLLAE
GSPVPAVRLTRIFRQAQQSGVVTNAHRINAGQPPLTQGLNDFFLFVEDETADAGKLAVDV
AARRIPAKFGLDPRRDVQVLAPMHRGPAGAGELNGLLQQSITPGRPDVPEKRFGGRVFRV
GDKVTQIRNNYDKGENGVFNGTVGVVTALDLDEQRLTVRTDEDEEIGYDFDELDELAHAY
AMTIHRSQGSEYPAVVIPVTNSAWMMLQRNLLYTAVTRAKKLVVLVGSRKAIGQAVRTVS
AGRRCTALDFRLRGGSGEDFA
NT seq 2226 nt   +upstreamnt  +downstreamnt
atgtccaacatggccgtcgtcgaaggggtcctggagcggatcacgtacgccaacgaggag
aacgggtacacggtcgcccgcgtcgacaccgggcgcggtgccggggatctgctcacggtg
gtcggttcgctgctcggggcgcaggtcggtgagtcgctgcggatggagggccgttggggc
tcgcactcccagtacggcaagcagttcaccgtcgagaactacaccaccgtcctgcccgcc
accatccagggcatccgccgctatctcggctccgggctgatcaagggcatcgggccggtc
atggccgaccggatcaccacccatttcggcgtcgacaccctcgacatcatcgagaacgca
ccgaagcggctcgtcgaggtccccggcctcggccccaagcgcacgaagatgatcgcggcg
gcttgggaggagcagaaggccatcaaggaggtcatggtcttcctccagggcgtcggcgtc
tccacctccatcgccgtgcgcatctacaagaagtacgaggacgcctcgatctccgtcgtg
aagaaccagccctaccggctggccgccgacgtctggggcatcggcttcctcaccgccgac
aagattgcccaggcggtcggcattccgcacgacagcccggagcgggtcaaggccggtctg
cagtacgccctctctcagtcctccgaccaggggcactgcttcctccccgaggagaggctc
atcgcggacggggtcaagctcctccaggtcgacaccgggctggtcatcgagtgcctggcc
gagctggccgccgatccggagggcgtcgtacgggagaaggtgccgtcgccggaagggggc
gagccgatcacggccgtctacctcatccccttccatcgggccgagctgtccctcgccggg
caggtcaggcggttgctgaacaccgccgaggaccggatgcccgccttccaggacgtggac
tggaagaaggcgctggcctggctcgccacgcgtacgggagccgatctcgcgcccgaacag
gaggaggccgtacggctcgcgctcagccggaaggtggccgtcctgaccggcgggcccggc
tgcgggaagtccttcaccgtccggtccatcgtcgagctggcccgggcgaagaaggccaag
gtggtgcttgccgctccgaccgggcgcgcagccaaacgcctctccgagctgaccggggcc
gaggcgtccaccgtgcatcggctgctggagctgaagccgggcggggacgcggcgtacgac
cgggaccggccgctcgacgccgatctggtcgtcgtcgacgaggcatccatgctcgatctg
ctcctcgccaacaagctcgtgaaggccgtggcacccggtgcccacctcctcctcgtgggc
gatgtcgaccagttgccctcggtcggggcgggagaggtgctgagcgacctcctcgcggaa
ggcagcccggtgcccgccgtccggctgacccggatcttccggcaggcccagcagtcgggc
gtcgtgaccaacgcccaccgcatcaacgccggacagccgcccctcacccaggggctgaac
gacttcttcctcttcgtggaggacgagacggccgacgcgggcaagctggcggtggacgtg
gcggcccgccgtattccggccaagttcggcctcgacccacgccgtgacgtgcaggtcctc
gccccgatgcaccgggggccggcgggcgcgggcgagctgaacgggctgctccagcagtcc
atcacccccggccgccccgacgtccccgagaagcggttcggcggccgtgtcttccgggtc
ggtgacaaggtcacccagatccgcaacaactacgacaagggcgagaacggcgtcttcaac
ggcacggtcggcgtcgtcaccgccctcgacctggacgaacagcggctcaccgtccgtacc
gacgaggacgaggagatcggctacgacttcgacgagctggacgagctggcccacgcctac
gccatgacgatccaccgctcccagggcagcgagtacccggcggtcgtcatccccgtcacc
aacagtgcctggatgatgctccagcgcaatctgctctacaccgccgtgaccagggccaag
aagctcgtcgtactggtcgggtcccgtaaggcgatcggtcaggccgtccgcacggtttcc
gcaggcagacgctgtacggcactggatttccggctccgcggcggctcgggagaagacttc
gcgtga

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