Streptomyces sp. CFMR 7: ABE83_24555
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Entry
ABE83_24555 CDS
T04074
Name
(GenBank) helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
scz
Streptomyces sp. CFMR 7
Pathway
scz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABE83_24555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scz03400
]
ABE83_24555
Enzymes [BR:
scz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABE83_24555
DNA repair and recombination proteins [BR:
scz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABE83_24555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
PIF1
Helicase_RecD
TraI_hel_assoc_N
PhoH
NPHP3_N
AAA_16
UvrD_C
Herpes_Helicase
nSTAND3
DEAD
UvrD-helicase
AAA
TrwB_AAD_bind
SLFN-g3_helicase
DUF87
ABC_tran
AAA_28
HTH_IclR
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ALC29868
UniProt:
A0A0M5J525
LinkDB
All DBs
Position
5862549..5864774
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AA seq
741 aa
AA seq
DB search
MSNMAVVEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGSLLGAQVGESLRMEGRWG
SHSQYGKQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPVMADRITTHFGVDTLDIIENA
PKRLVEVPGLGPKRTKMIAAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYEDASISVV
KNQPYRLAADVWGIGFLTADKIAQAVGIPHDSPERVKAGLQYALSQSSDQGHCFLPEERL
IADGVKLLQVDTGLVIECLAELAADPEGVVREKVPSPEGGEPITAVYLIPFHRAELSLAG
QVRRLLNTAEDRMPAFQDVDWKKALAWLATRTGADLAPEQEEAVRLALSRKVAVLTGGPG
CGKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLSELTGAEASTVHRLLELKPGGDAAYD
RDRPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLSDLLAE
GSPVPAVRLTRIFRQAQQSGVVTNAHRINAGQPPLTQGLNDFFLFVEDETADAGKLAVDV
AARRIPAKFGLDPRRDVQVLAPMHRGPAGAGELNGLLQQSITPGRPDVPEKRFGGRVFRV
GDKVTQIRNNYDKGENGVFNGTVGVVTALDLDEQRLTVRTDEDEEIGYDFDELDELAHAY
AMTIHRSQGSEYPAVVIPVTNSAWMMLQRNLLYTAVTRAKKLVVLVGSRKAIGQAVRTVS
AGRRCTALDFRLRGGSGEDFA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacatggccgtcgtcgaaggggtcctggagcggatcacgtacgccaacgaggag
aacgggtacacggtcgcccgcgtcgacaccgggcgcggtgccggggatctgctcacggtg
gtcggttcgctgctcggggcgcaggtcggtgagtcgctgcggatggagggccgttggggc
tcgcactcccagtacggcaagcagttcaccgtcgagaactacaccaccgtcctgcccgcc
accatccagggcatccgccgctatctcggctccgggctgatcaagggcatcgggccggtc
atggccgaccggatcaccacccatttcggcgtcgacaccctcgacatcatcgagaacgca
ccgaagcggctcgtcgaggtccccggcctcggccccaagcgcacgaagatgatcgcggcg
gcttgggaggagcagaaggccatcaaggaggtcatggtcttcctccagggcgtcggcgtc
tccacctccatcgccgtgcgcatctacaagaagtacgaggacgcctcgatctccgtcgtg
aagaaccagccctaccggctggccgccgacgtctggggcatcggcttcctcaccgccgac
aagattgcccaggcggtcggcattccgcacgacagcccggagcgggtcaaggccggtctg
cagtacgccctctctcagtcctccgaccaggggcactgcttcctccccgaggagaggctc
atcgcggacggggtcaagctcctccaggtcgacaccgggctggtcatcgagtgcctggcc
gagctggccgccgatccggagggcgtcgtacgggagaaggtgccgtcgccggaagggggc
gagccgatcacggccgtctacctcatccccttccatcgggccgagctgtccctcgccggg
caggtcaggcggttgctgaacaccgccgaggaccggatgcccgccttccaggacgtggac
tggaagaaggcgctggcctggctcgccacgcgtacgggagccgatctcgcgcccgaacag
gaggaggccgtacggctcgcgctcagccggaaggtggccgtcctgaccggcgggcccggc
tgcgggaagtccttcaccgtccggtccatcgtcgagctggcccgggcgaagaaggccaag
gtggtgcttgccgctccgaccgggcgcgcagccaaacgcctctccgagctgaccggggcc
gaggcgtccaccgtgcatcggctgctggagctgaagccgggcggggacgcggcgtacgac
cgggaccggccgctcgacgccgatctggtcgtcgtcgacgaggcatccatgctcgatctg
ctcctcgccaacaagctcgtgaaggccgtggcacccggtgcccacctcctcctcgtgggc
gatgtcgaccagttgccctcggtcggggcgggagaggtgctgagcgacctcctcgcggaa
ggcagcccggtgcccgccgtccggctgacccggatcttccggcaggcccagcagtcgggc
gtcgtgaccaacgcccaccgcatcaacgccggacagccgcccctcacccaggggctgaac
gacttcttcctcttcgtggaggacgagacggccgacgcgggcaagctggcggtggacgtg
gcggcccgccgtattccggccaagttcggcctcgacccacgccgtgacgtgcaggtcctc
gccccgatgcaccgggggccggcgggcgcgggcgagctgaacgggctgctccagcagtcc
atcacccccggccgccccgacgtccccgagaagcggttcggcggccgtgtcttccgggtc
ggtgacaaggtcacccagatccgcaacaactacgacaagggcgagaacggcgtcttcaac
ggcacggtcggcgtcgtcaccgccctcgacctggacgaacagcggctcaccgtccgtacc
gacgaggacgaggagatcggctacgacttcgacgagctggacgagctggcccacgcctac
gccatgacgatccaccgctcccagggcagcgagtacccggcggtcgtcatccccgtcacc
aacagtgcctggatgatgctccagcgcaatctgctctacaccgccgtgaccagggccaag
aagctcgtcgtactggtcgggtcccgtaaggcgatcggtcaggccgtccgcacggtttcc
gcaggcagacgctgtacggcactggatttccggctccgcggcggctcgggagaagacttc
gcgtga
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