Streptococcus dysgalactiae subsp. equisimilis RE378: GGS_0055
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Entry
GGS_0055 CDS
T02269
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sda
Streptococcus dysgalactiae subsp. equisimilis RE378
Pathway
sda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GGS_0055 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sda03400
]
GGS_0055 (ruvB)
Enzymes [BR:
sda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GGS_0055 (ruvB)
DNA repair and recombination proteins [BR:
sda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GGS_0055 (ruvB)
RecFOR pathway proteins
GGS_0055 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_14
Mg_chelatase
DUF815
AAA_16
AAA_3
nSTAND3
Sigma54_activat
Rad17
RNA_helicase
NTPase_1
AAA_18
NB-ARC
IstB_IS21
TsaE
AAA_17
AAA_24
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
BAM60247
LinkDB
All DBs
Position
52707..53762
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AA seq
351 aa
AA seq
DB search
MKPQFFLTSSSPTLCYNTIMARILDNDVMGDEELVERTLRPQYLREYIGQDKVKEQLTIF
IEAAKLRDESLDHVLLFGPPGLGKTTMAFVIANELGVNLKQTSGPAIEKAGDLVAILNDL
EPGDVLFIDEIHRLPMAVEEVLYSAMEDFYIDIMIGAGDTSRSVHLDLPPFTLIGATTRA
GMLSNPLRARFGITGHMEYYQEADLTEIVERTADIFDMEIVHEAAQELACRSRGTPRIAN
RLLKRVRDYAQIVGDGVITAQITDKALTMLDVDREGLDYVDQKILRTMIEMYQGGPVGLG
TLSVNIAEERDTVEDMYEPYLIQKGFLMRTRTGRVATEKAYRHLGYPYPSK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccacaattcttcctcacttcctcctctcctactttgtgttataatactattatg
gctagaattttagataatgatgtaatgggggatgaagaacttgttgagcgaacgcttcgt
ccgcagtatttacgtgagtacattgggcaagataaggttaaggaacaattaaccattttt
attgaagcggctaagctccgtgatgaatctttagatcatgtgttgttgtttggccctcca
ggtttagggaaaaccacaatggcatttgtgattgctaatgaattaggggttaacttgaag
caaacttcaggaccagcgattgagaaggctggtgatttggtagctattttgaatgatctg
gaaccaggagatgtgctctttattgatgaaattcatcgtctgcctatggcagtcgaagaa
gtattgtacagtgctatggaagatttttacatcgacattatgattggtgctggggacact
agtcgaagtgttcatttggatttgccaccttttacattgattggagctacaacacgagct
gggatgttatcaaatcctttgcgagctcgatttggcattactggacacatggagtattat
caggaagctgatttgactgaaattgtcgaacgaacagccgatatttttgacatggaaatt
gttcacgaagcggctcaagagttagcttgccgtagtcggggaacaccgcgtattgctaat
agattgttaaagcgggtacgtgattatgctcagattgttggagatggcgtcatcacggct
cagattacagacaaagccctaaccatgcttgatgttgatcgagaaggtcttgattatgta
gatcagaagattttacgcaccatgattgaaatgtatcagggtggacctgttgggttaggc
actttatcagttaatattgcagaagaacgtgatacagttgaagacatgtacgaaccttat
ctgattcaaaaaggatttctaatgcgtacacgaactggtcgtgtggcgacggaaaaagcc
tatcgtcatcttggttatccatatccgtctaagtaa
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