Streptococcus dysgalactiae subsp. equisimilis RE378: GGS_1038
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Entry
GGS_1038 CDS
T02269
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sda
Streptococcus dysgalactiae subsp. equisimilis RE378
Pathway
sda03420
Nucleotide excision repair
sda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GGS_1038
03430 Mismatch repair
GGS_1038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sda03400
]
GGS_1038
Enzymes [BR:
sda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GGS_1038
DNA repair and recombination proteins [BR:
sda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GGS_1038
MMR (mismatch excision repair)
Other MMR factors
GGS_1038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Pox_VLTF3
Motif
Other DBs
NCBI-ProteinID:
BAM61182
LinkDB
All DBs
Position
complement(1091176..1093494)
Genome browser
AA seq
772 aa
AA seq
DB search
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITF
TNKAAREMKERALALNPATKDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLM
KRILKQLNIDPKKWNERSILGTISNAKNDLLDEKGYEAQAADMYSQIVARCYKAYQEELR
RSEALDFDDLIMMTLRLFDANPDVLAYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFKN
ICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRN
RRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMAQEIGKNFKDFAVLYRTNAQSR
TIEEALLKSNIPYTMVGGTKFYSRKEIRDLIAYLTIVANPADNISFERIVNEPKRGVGPG
TLDKLRQFAYESDQSLLEAASNLLMSPLKGKAAQAIMDLANILGQLRQDLDQMSITDLAE
ALLEKTGYLDSLRLQNTLESQARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLND
LALIADTDDSQAEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERR
LAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLKEISEELLSYKGLARPAQSSFGVR
FSTETHTQFGQGMSLSEALQARKAQAQVRQSAQPMQAHTIPSASTSSVLPFGSNSSVEEV
TWQIGDIAHHKKWGDGTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKK
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttattaaatggaatgaatgatcggcaggcacaagctgttcaaacaactgaa
ggccccttattgattatggcgggggctggttctggtaaaacaagggtactgacccatcgt
attgcctatttaattgatgaaaaatttgtcaatccttggaatattttagctattaccttt
actaataaggctgcgcgtgaaatgaaagaaagagccttggccttaaatccagctactaaa
gataccttaattgctacctttcactccatgtgtgtacggattctgcgtcgtgaggctgat
cacattggttacaaccgaaacttcacaatcgtggatccaggtgagcaacgaaccttgatg
aagcgcattttaaaacaattaaatatagaccctaaaaagtggaatgaacgttctatttta
ggaactatttcaaacgctaaaaatgatttacttgatgagaagggatacgaggcgcaggct
gctgatatgtatagtcaaatagtagcgagatgttacaaagcttatcaggaagaattacga
cgtagcgaagcattggactttgatgatttaatcatgatgactctacgcctgtttgacgct
aatcctgacgtattagcttattaccagcagcgctaccaatacattcacgtggacgagtat
caagataccaaccatgcccaatatcaattagtcaagttgctagcctctcgctttaaaaac
atttgcgttgttggagatgctgatcagtctatctatggttggcggggagctgacatgcaa
aatattcttgattttgaaaaagattacccagatgctaaggtagtgcttttagaagaaaac
tatcgctctaccaagaaaattctgcaagcagctaacgacgtgattaacaataaccgtaat
cgccgtcctaagaaactttggacacaaaatgcagacggggaacaactggtttattatagg
gcaaatgatgagcgagatgaggcagtatttgtcgcttctaccattagcaacatggctcaa
gaaatcgggaaaaatttcaaagatttcgctgttttatatcgtaccaatgcccaatcccgt
acgattgaagaagcgctcttaaaatccaacattccttacaccatggttggcggaactaag
ttctatagccgtaaagaaattcgcgacttaattgcctacttaacgattgtcgctaaccca
gctgataatatttcctttgagcggattgtgaatgagcctaaacgaggtgttggtccagga
acgcttgataaactgcgtcagtttgcctatgagagtgaccagtctttattagaagcagct
tcaaatctattgatgtcccccttgaaaggtaaagcagcacaagctatcatggacttggcc
aatattctcggtcagctacgtcaagacctagatcagatgagtatcaccgacttagcagaa
gctttgttagaaaaaacaggctatttagatagcttacgcctgcaaaatacattggaaagc
caagcccgtatcgaaaatatcgaagaattcttatctgttaccaaaaattttgacgagtca
agtgcctctcaagaagaagacgaaaccggtgttgatcgcttgggacgttttttaaacgat
ttagcactgattgctgatacagatgattcccaagcagaagctgctgaagtaaccttaatg
accctacatgctgccaaaggcttggagttccctgttgttttcttaattggtatggaagaa
ggtgtcttccccttatcacgtgcctctgaagatccagatgaattggaagaagaaagacgt
ttagcttatgtcggaatcacaagagctgaagaagttctctttatgaccaatgccaacacc
agaaccctctttggtaaaagtagttataaccgtccaacacgcttcttgaaagaaatttca
gaggaactactctcttataaaggattggcaagaccagcacaatcttcatttggtgtgcgt
ttttctactgaaacacacacacagtttggacaagggatgagcctatcagaagccttacaa
gctcgaaaggcccaggctcaagtaagacaatcagcacagccaatgcaggcacatacgata
ccatcagcttcaactagctcagttttaccgtttggttctaatagctctgtagaagaggtc
acttggcagattggcgatatcgctcaccataaaaaatggggagacgggactgtgcttgag
gtttcaggctccggaaaaacgatggaattgaaaatcaaatttccagaagttggtttaaag
aaattactagcaagtgttgctcctattgagaaaaaataa
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