Streptococcus dysgalactiae subsp. equisimilis RE378: GGS_1050
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Entry
GGS_1050 CDS
T02269
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sda
Streptococcus dysgalactiae subsp. equisimilis RE378
Pathway
sda03030
DNA replication
sda03430
Mismatch repair
sda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GGS_1050 (dnaE)
03430 Mismatch repair
GGS_1050 (dnaE)
03440 Homologous recombination
GGS_1050 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sda03032
]
GGS_1050 (dnaE)
03400 DNA repair and recombination proteins [BR:
sda03400
]
GGS_1050 (dnaE)
Enzymes [BR:
sda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GGS_1050 (dnaE)
DNA replication proteins [BR:
sda03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GGS_1050 (dnaE)
DNA repair and recombination proteins [BR:
sda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GGS_1050 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
PHA-1
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BAM61193
LinkDB
All DBs
Position
complement(1106558..1109668)
Genome browser
AA seq
1036 aa
AA seq
DB search
MFAQLDTKTVYSFMDSLIDLSHYFEQAKQLGYQTIGIMDRDNLYGAYHFIRGCQKHGLRP
VLGLEVEVVYQEQQVLLNLIAKNTQGYHQLLKISTAKMSGKLQMDYLCQHLEGLAVIIPN
RVWTDTLAVPFDYYIGVDQYTDFSHMDSKKQFIPLRTVRYFAQDDMETLHMLHAIRDNLS
LAETPVVESDQELGDCQQLTAYYQAHCPQALQNLEDLVSGIHYDFDTDLKLPRFNRDKSA
KQELQELTQAGLVAKGLWQEPYQTRLAHELTVISDMGFDDYFLIVWDLLRFGRSKGYYMG
MGRGSAAGSLVAYALDITGIDPIRHDLLFERFLNKERYSMPDIDIDLPDIYRSEFLRYVL
NRYGSDHSAQIVTFSTFGPKQAIRDVFKRFGVPEYELTNLTKKIGFKDSLATVYEKNISF
RQTINSRVEFQKAFTIAQRIEGNPRQTSIHAAGIVMSDDNLTNHIPLKAGDEMMVTQYDA
NAVEANGLLKMDFLGLRNLTFVQKMQEKVAKEYGQHIDIAAIDLEDPKTLALFAKGDTRG
IFQFEQNGAINLLKRIKPQRFEEIVATTSLNRPGASDYTVNFIKRRQGQEKIDLIDPVIA
PILESTYGIMLYQEQVMQIAQAYAGFTLGKADLLRRAMSKKNLLEMQKMEEAFVAGAKQL
GRSEETAKLLFKRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDIMMNYSSSDY
ITDALESNFQVAQVTINSIPYTDKIESNSIYMGLKNIKGLPRDFAYWIIEQRPFSSVEDF
LTRVPEKYQKIAFLEPLIKIGLFDCFDPNRKKILENLEGLLVFVNELGSLFADSSFNWGD
TEDYSTTEKYSFEQELIGVGMSKHPLIDIAEKSTQAFTPISQLVKDKEATILVQVDSIRT
IRTKTSGQQMAFLSVNDTKKKLDVTLFPEEYAIYKDQLKEGELYYLKGRIKERNHRLQMV
CQQVQMAISQKYWLLVENHQFDSQISQVLAAFPGKTPVVIHYQENKETIELTNLQVQLNP
TLEEKLHSYVLKTVFR
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctcaattagataccaaaaccgtttattcatttatggatagtttgattgattta
agtcactattttgaacaagcaaaacaacttggctaccaaactataggaattatggatagg
gataatctttacggagcttatcattttattagaggttgccaaaaacatggacttcgacct
gttttaggtttggaagtagaggttgtctatcaagagcagcaggtgctccttaatttaatt
gccaagaatacacaaggctatcatcagcttttgaagatttccacggcaaaaatgtcgggc
aagcttcagatggactatctctgccaacatttggaaggattagcggttattattcctaat
agggtctggaccgatacattagcggttccctttgactattatatcggtgttgaccagtat
actgatttttctcatatggattctaagaagcagtttattcccctaaggacagttcgttat
tttgcacaagatgatatggaaaccctgcacatgctgcatgccattcgagataacctcagt
ctggcggagacccctgtggtagaaagtgatcaagagttaggagattgtcaacaattaact
gcctactatcaagcacactgcccccaagctttacagaatttagaagacttagtgtcagga
atccactatgactttgatacagacttaaaattgcctcgttttaatcgtgataagtctgct
aaacaagaactgcaagaactgactcaagcaggtttagtggctaaaggcttatggcaagag
ccttatcagacacggttagctcatgaattaactgttatttctgacatgggctttgatgat
tatttccttattgtgtgggatttacttcgttttggacgcagtaagggctattatatggga
atggggcgtggctcagccgcaggaagtttagttgcctatgctctggacattacagggatt
gatccgatacgacatgatttgctttttgaacgctttttaaataaagaacgttatagcatg
cctgatattgatattgacctccctgatatctaccgttcagaatttcttcgctatgtgctt
aatcggtatggcagtgatcattctgcccagattgtcaccttttcgaccttcggtcctaaa
caagcgattcgtgatgtttttaagcggtttggcgttccagaatatgaattaactaatctc
actaaaaagattggttttaaagatagtttagccacagtgtatgaaaagaatatttccttt
agacaaaccattaatagtcgagttgaatttcaaaaggcttttactatagctcaacggatt
gaggggaatccaagacagacctctattcatgcggctggtattgtgatgagtgatgataac
ctaacaaatcatatcccgctaaaagcaggtgatgagatgatggttacccagtatgatgct
aatgctgttgaagcaaatggtcttttaaaaatggatttcttggggcttagaaatttaacg
tttgttcaaaaaatgcaagagaaggttgctaaagagtatggtcaacacattgacattgca
gcaattgacttagaagatcccaaaacattagccctgtttgctaaaggagataccagaggt
attttccaattcgaacaaaatggggctatcaatcttttaaaacgcattaaacctcaacgt
tttgaagaaattgtggcgacaaccagtttaaatagaccgggcgccagtgattacactgtg
aattttattaagcgacgccagggacaagaaaagatagatttaattgatcctgttattgcg
cctattttagagtctacttatgggattatgctctatcaagaacaggtcatgcagattgct
caggcctatgcaggttttacgcttggaaaagccgacttgttacgccgtgctatgtctaag
aaaaatctccttgaaatgcagaaaatggaagaggcttttgttgcaggtgctaagcaatta
gggaggtccgaagaaacagctaagttactttttaaacggatggaaaaatttgcgggttat
ggctttaaccgtagtcatgcctttgcttactcagccttagcttttcaattagcatatttt
aaggctcactaccctgcggttttttacgatatcatgatgaattactctagcagcgattac
attacagacgctctagaatcgaactttcaagtggcacaagttactattaatagtatccca
tacactgataaaattgagtctaatagtatctacatgggactaaaaaacatcaagggatta
ccaagagattttgcttattggattattgaacagagaccctttagcagtgtagaagatttc
ttgacccgagtacctgaaaagtaccaaaagatagcctttttggaacccttaattaaaata
ggattatttgactgctttgaccctaatcgaaaaaagattttagaaaatttagaggggtta
ttagtgtttgtcaatgaactggggtctttatttgcggactcttcctttaactggggtgac
acagaagattactcaacaactgaaaaatattcttttgaacaggaactcattggggttggt
atgagtaagcatcccttaattgacattgcggagaaaagtactcaagcttttactcccatt
tcacagttagtcaaggataaggaagcaaccatactggttcaagtagatagcatcagaacg
attaggacaaaaacaagcgggcagcaaatggcgttcctatcagttaatgacactaagaaa
aagcttgatgtcaccctttttccagaagagtatgctatttataaagaccagctgaaagaa
ggagaactctattacctaaaaggtagaattaaagaaagaaatcaccggctgcagatggtg
tgtcagcaagtgcaaatggctattagccaaaaatattggttattagttgaaaaccatcag
tttgattcacagatttcacaagttttggcagctttccccggaaaaactccggttgtcatt
cactatcaagaaaataaggaaacaattgaattaactaatctccaagttcaactgaaccct
accttggaagaaaaacttcatagctacgttttgaaaacggtttttcgataa
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