Streptococcus dysgalactiae subsp. equisimilis RE378: GGS_1163
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Entry
GGS_1163 CDS
T02269
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sda
Streptococcus dysgalactiae subsp. equisimilis RE378
Pathway
sda03410
Base excision repair
sda03430
Mismatch repair
sda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GGS_1163 (recJ)
03430 Mismatch repair
GGS_1163 (recJ)
03440 Homologous recombination
GGS_1163 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sda03400
]
GGS_1163 (recJ)
DNA repair and recombination proteins [BR:
sda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GGS_1163 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GGS_1163 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GGS_1163 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BAM61301
LinkDB
All DBs
Position
complement(1223521..1225728)
Genome browser
AA seq
735 aa
AA seq
DB search
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYDRGIRTEEALDEFLTADLSQLHD
PYLLHDMAKAVPRIRQAIEEGERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRF
TDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQEQEVDVIVTDHHSLPEELPE
AFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLAMLKHTERVGLQELMSLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIEL
LMGFDDQEAQAIALMIKKKNEERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIV
AGRIMEAIGQTVIVLAIDNGFAKGSARSLEAINIFEALSGNRDLFTAFGGHAGAAGVTLP
VDNLEALSDLLCQFVIERGLDQTAKNTLTIDERLSLEDLSLDTLKSLDKLAPYGMDHPKP
IFYVKDIKVSQARTMGQDQSHLKFKVSQGKTSFDVLAFGQGSQLQDFQQATGLELAVTLS
VNHWNGNTSLQLMLVDARVEGVQLLDLRSKTAKLPEGIPTIEEDPNATVIVIKELPESFK
DWRHQFADRTFDAIYFKNQIKHPYYLTGFGSREQFAKLYKTIYQFPEFDVRHKLTDLSRY
LNIDKLLLIKLIQIFEELAFVTIEDGLMTVNPQAQKRDISESRIYQELKELVKFQEIMAL
ASPQEMYDYLVNSKP
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatccaaatatagctggaaaataaaagacaagaagccagatgatggcttcttt
aagctagcaaagacaaaaggtctaacccagaccgccgctcagttgatttatgatcgaggg
ataaggactgaagaagccttagatgagtttttaacagcggacttgtctcaactgcatgat
ccttacttgctacatgacatggcaaaagctgtgccaagaattcgtcaagctattgaagag
ggcgaacgaattctcatttacggcgactatgatgctgatggcatgacgtcggcttctatt
gtcaaagaaaccctagacatgatgggagcagagcctttggtttatcttcccaaccgcttt
acagatggctatggccccaaccagagcgtctataaatattttattgagcaggaagctgtg
tccctaattatcacggttgataatggcgtggccggacatgaagcgattagatatgctcaa
gaacaggaagttgatgtcattgtaactgaccatcatagcctgcctgaagaattgccagaa
gcctttgccatcattcaccctgagcatcctgatgctgattatccctttaaacacttagct
ggctgtggcgttgcctttaaattggcaacagctttgctagaaagtttaccaacagactgt
ctagacttggtagctattggaaccattgccgatatggtaagcttgacaggtgaaaaccgt
gttttagtcaaaaatggtctggccatgctcaaacacaccgaaagagtgggcttgcaggag
ttgatgtccttgtctcctattgatttggaacattttaatgaagacgccattggctttcag
attgctccgcaattaaatgctttagggcgcttagatgaccctaatccagccattgagcta
ctgatgggctttgatgaccaagaagctcaagcgattgccttgatgattaagaaaaaaaat
gaagagcgtaaggctttggtccaagacatttttgatcaagcgatggctatggttgatcct
caaaaaccagttcaagtcttagctcaagctggttggcatccaggtgtgctaggtattgta
gcgggtcgcattatggaagccattggacagacggtcattgtcttagctattgataacggt
tttgcgaaaggctcggccagaagtttagaggccattaatatatttgaagccttaagtggg
aatcgtgatctttttacagctttcggtggacatgctggtgcagctggggtgactttgccc
gtggataatttagaagctttatcggacttgctttgtcagtttgtgatagaacgtggctta
gatcagactgctaaaaatacgttaactattgatgaaaggctgtctttggaggatcttagt
cttgatactttaaagagtttggacaaactagccccctatgggatggatcatcctaagcca
atcttttatgttaaggatattaaagttagtcaagcgcgtaccatgggtcaagaccagagt
catcttaaattcaaagtcagccagggtaagacctcctttgatgttctggcttttggtcaa
ggaagccaactacaagactttcaacaagctactggtttagagttagcggtaactttatcc
gtcaaccactggaacggcaataccagcctccaactaatgttggttgacgctcgtgttgaa
ggggtgcagttgcttgatttacggtcaaaaacagctaaactacccgaaggtattccgacg
attgaggaagatcccaatgcaacagttattgttattaaagagcttccagagtcttttaaa
gactggcgtcatcagttcgctgatagaaccttcgatgccatttattttaaaaatcagatt
aaacacccctattacctaacaggttttggaagtcgtgaacagtttgctaaactctataaa
accatttaccaatttccagaatttgatgtgcgtcataaattgactgacttgagtcgctac
ttaaacattgacaaacttttactgattaagctcattcagatttttgaagagctagctttt
gtgacgattgaagatggcctgatgacagttaacccacaagcgcaaaagcgagatatttct
gagagtcgtatctaccaagagctaaaagaactcgtgaagttccaagaaatcatggccttg
gccagtcctcaagaaatgtatgattatttggtcaattcgaaaccataa
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