Streptococcus dysgalactiae subsp. equisimilis RE378: GGS_1320
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Entry
GGS_1320 CDS
T02269
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sda
Streptococcus dysgalactiae subsp. equisimilis RE378
Pathway
sda03030
DNA replication
sda03430
Mismatch repair
sda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GGS_1320 (holA)
03430 Mismatch repair
GGS_1320 (holA)
03440 Homologous recombination
GGS_1320 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sda03032
]
GGS_1320 (holA)
03400 DNA repair and recombination proteins [BR:
sda03400
]
GGS_1320 (holA)
Enzymes [BR:
sda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GGS_1320 (holA)
DNA replication proteins [BR:
sda03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GGS_1320 (holA)
DNA repair and recombination proteins [BR:
sda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GGS_1320 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
BAM61457
LinkDB
All DBs
Position
complement(1416914..1417960)
Genome browser
AA seq
348 aa
AA seq
DB search
MIAIEKIEKLNKQNLGLITLVTGEDIGQYSQLKSRLMTQIAFDKDDLTYSYFDMSETAYQ
DAEMDLLSLPFFAEQKVVIFDHLLDITTNKKSFLKEKDLKAFEAYLENPLETTRLIIFAP
GKLDSKRRLVKLLKRDAIILEASPLKEAELRTYFQKYSHQLGLGFESGAFDQLLLKSNDD
FSQIMKNMAFLKAYKKSGTVSLADIEQAIPKSLQDNIFDLTRLVLRGKIDAARDLIHDLR
LSGEDDIKLIAIMLGQFRLYLQLAILAKEGKSEQQLVTSLSEILGRRVNPYQVKYAIKDS
RTLSLKELAFVVKTLIETDYQIKTGVYEKQYLVDIALLKMVTTLQRSD
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgatagaaaagatagagaaactgaataaacaaaatttaggcctcattaccttg
gtaactggggaagatattggtcaatatagccaattaaaatcgcgtttaatgacgcaaatt
gcttttgataaggatgatttaacctattcttattttgacatgtccgagacggcttatcag
gatgcagaaatggatttgttgagtttgcctttttttgctgagcagaaggtggtcattttt
gatcatttgttagatatcacgaccaataaaaaaagtttcttaaaagaaaaagacctaaag
gcctttgaagcctatttagaaaatcccttagaaactactcgactaattatctttgcacca
gggaagttggatagtaaacgacgcttggtcaaactcttaaaacgagatgctattattttg
gaagcaagtccgttgaaagaagcggagctgagaacttattttcaaaaatacagtcatcaa
ctgggtttaggtttcgagagtggtgcctttgaccaattgcttttgaaatcaaacgatgat
tttagtcaaatcatgaaaaacatggcttttttaaaagcttataaaaaatcggggactgtc
agtctagcagatattgaacaggccattcctaaaagtttgcaagacaatatttttgactta
accagactcgttctacgaggaaaaatcgatgcagctagagatttgattcatgatttacgc
ttatcaggggaagatgatattaaattaattgctattatgttggggcaatttcgcttatat
ttacagcttgccattcttgctaaagaaggaaaatcagaacagcagcttgtaaccagtttg
tcagagatacttggtcggcgagttaatccttatcaagttaagtatgctattaaagattct
agaacgttgtctctcaaggagctagcatttgtagtcaaaaccttaattgagacagattat
cagattaaaactggggtttatgaaaaacagtatttagttgatatagctcttttaaagatg
gtaaccacattacaaaggagcgattga
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