Streptococcus dysgalactiae subsp. equisimilis RE378: GGS_1531
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Entry
GGS_1531 CDS
T02269
Name
(GenBank) putative phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sda
Streptococcus dysgalactiae subsp. equisimilis RE378
Pathway
sda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GGS_1531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sda03019
]
GGS_1531
Messenger RNA biogenesis [BR:
sda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GGS_1531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
KH_2
dUTPase
KH-I_KHDC4-BBP
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
BAM61653
LinkDB
All DBs
Position
complement(1652931..1654538)
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AA seq
535 aa
AA seq
DB search
MVNIILLIVSALIGLILGYALISIRLKSAKEAAELTLLNAEQEAVDIRGKAEVDAEHIKK
TAKRESKANRKELLLEAKEEARKYREEIEQEFKSERQELKQLETRLAERSLTLDRKDENL
SSKEKVLDSKEQSLTDKSKHIDERQLQVEKLEEEKKAELEKVAAMTIAEAREVILMETEN
KLTHEIATRIRDAERDIKDRTDKTAKDLLSQAMQRLAGEYVTEQTITSVHLPDDNMKGRI
IGREGRNIRTLESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTLESLIADGRIHPARIE
ELVEKNRLEMDNRIREYGEAAAYEIGAPNLHPDLIKIMGRLQFRTSFGQNVLRHSVEVGK
LAGILAGELGENVALARRAGFLHDMGKAIDREVEGSHVEIGMEFARKYKEHPVVVNTIAS
HHGDVEPDSVIAVLVAAADALSSARPGARNESMENYIKRLRDLEEIATSFDGVQNSFALQ
AGREIRIMVQPEKVSDDQVVILSHKVREKIESNLDYPGNIKVTVIREMRAVDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggttaatattattttattaattgtttctgccctcattggtttaatattaggttatgca
cttatttcgattagactcaagtctgcgaaggaagctgcagagttgactcttttaaacgct
gaacaagaagctgttgatattcgtggcaaagcagaagtagatgctgaacacatcaaaaaa
acagctaaacgtgaaagtaaagcaaatcgtaaagaattacttttagaagcaaaagaagag
gcaagaaaatatcgtgaagagattgaacaagaatttaagtctgaaagacaagagcttaaa
caactcgagacacgcttagcggagcgctccttaactcttgaccgtaaagatgaaaaccta
tcaagtaaagaaaaagtactggatagtaaagaacaaagtctgaccgataaatctaaacat
attgatgagcggcaacttcaagtggaaaaacttgaagaggagaaaaaagcagaactggaa
aaagttgctgcgatgacaattgcagaagcgcgtgaagtgattttaatggagacggaaaac
aaactgacccatgaaattgcgacgcgcattcgagatgccgaacgtgacatcaaagataga
acagacaaaacagccaaagatttattgtcacaagccatgcaacgtcttgctggtgaatat
gtgacggaacaaaccatcactagtgttcacctcccagatgataacatgaagggacgtatt
attggacgtgaaggtcgtaatattcgtaccttagaaagtctaactggtattgacgttatt
attgatgatacgccagaggtggttgtcttgtcaggattcgaccctattcgtcgcgagatt
gctcgtatgaccttggaatctctgattgcagatggtcgcattcatccagctcgtatcgaa
gaattggttgagaaaaatcgtcttgaaatggataatcgtattcgtgagtacggtgaagct
gcagcctatgagattggggcaccaaaccttcatcctgatttgatcaaaatcatgggacgt
cttcaattccgtacctcgtttggtcaaaatgtcctacgtcactctgttgaggttggtaaa
ctagctggtattttggctggtgagttaggtgaaaatgttgcccttgcccgtcgtgcaggt
ttcttgcatgatatgggtaaagctattgaccgtgaggttgaaggtagtcacgtggaaatt
ggaatggaatttgcgcgtaaatacaaagaacatccagttgttgtcaacactattgctagc
caccacggagatgtggagccagattcggttattgctgtgctagtagctgcagcggacgct
ctcagttcggcacgtccaggtgctcgtaatgagtcgatggagaattacatcaagcgtctt
cgtgacttagaagagattgcaacaagctttgatggggttcaaaatagttttgcccttcaa
gcaggacgtgaaatccgtatcatggtgcaacctgaaaaagtctcagatgatcaagttgtt
attttgtcacataaagtgagagaaaagattgaaagcaacttagattacccaggaaacatt
aaagtgactgttattcgtgaaatgcgagcagttgattatgccaagtag
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