Streptococcus dysgalactiae subsp. equisimilis RE378: GGS_1553
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Entry
GGS_1553 CDS
T02269
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sda
Streptococcus dysgalactiae subsp. equisimilis RE378
Brite
KEGG Orthology (KO) [BR:
sda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sda03019
]
GGS_1553
03009 Ribosome biogenesis [BR:
sda03009
]
GGS_1553
Enzymes [BR:
sda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GGS_1553
Messenger RNA biogenesis [BR:
sda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GGS_1553
Ribosome biogenesis [BR:
sda03009
]
Prokaryotic type
rRNA helicases
GGS_1553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
TerL_ATPase
SWI2_SNF2
Helicase_RecD
Flavoprotein
Motif
Other DBs
NCBI-ProteinID:
BAM61675
LinkDB
All DBs
Position
complement(1677188..1678531)
Genome browser
AA seq
447 aa
AA seq
DB search
MSFKDYHFKQYIQQALEEIGFVNPTEVQQRLIPIVNSGRDLVGESKTGSGKTHTFLLPIF
EKLDEAKAEVQVVVTAPSRELATQIFDACKQIAKHSPKDIRLANYVGGTDKLRQIEKLKS
GQPHIVIGTPGRIYDLVKSGDLAIHKATTFVVDEADMTMDMGFLDTVDKIAASLPKSVQI
LVFSATIPQKLQPFLKKYLTNPVIEQIKTETVIADTIDNWLVSTKGRDKNGQILEILKTM
QPYMAMLFVNTKERADDLHAFLVANGLKVAKIHGGIPPRERKRIMNQVKKLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGMAGTAITLYQPSDDSDIKELEKM
GIVFTPKMLKNGEFQDTYDRDRRQNREKSYQKLDTEMIGLVKKKKKKVKPGYKKKIQWAV
DEKRRKERRAENRAKGRAERKAKKQSF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaagattatcattttaagcaatacatccagcaagcactggaggaaattggc
tttgtcaatccaacagaggtccagcaacgcttgattcctattgtcaactccggccgtgac
ttagttggggaatcaaaaacaggttcagggaaaacccacacctttttgttgcccattttt
gaaaaacttgatgaagctaaagcagaagtgcaagttgttgttacagctcctagccgtgaa
ttagctactcaaatttttgatgcctgtaaacaaattgctaagcattctcccaaagatatc
cgtttggctaactatgtgggaggtacggataaattacgccaaattgaaaagttaaaaagc
ggccagccacacattgtcattggaactccgggtcgtatttatgatttggttaaatctggt
gacttagcgattcataaggccacgactttcgttgtggatgaggctgacatgaccatggac
atgggctttttggatacggttgataagattgcagcttctcttccaaagtctgttcagatt
ttggtgttctcagcaaccattccacagaaattacagccctttttgaaaaaatacttgacc
aatcctgttattgaacaaatcaaaacagagacagttattgctgatacgattgataactgg
cttgtgtcgacaaaaggcagggataaaaatgggcaaattttagagattcttaaaacgatg
cagccctatatggcaatgctttttgtcaatactaaagagcgcgcagatgacttgcatgcc
tttttagtggccaatggtttgaaggtagccaagattcatggtggcattcctccaagagaa
cgtaagcgtatcatgaaccaagttaaaaagttggactttgaatacattgttgctactgac
ttggcagcgcgcggaattgacattgaaggggtcagccatgtcatcaatgatgctattcca
caagatttatctttctttgtccatcgtgtaggccggacaggtcgaaatggtatggcagga
actgctattaccctttatcaaccaagtgatgactcagatatcaaagagttggaaaaaatg
ggaattgtctttacaccgaagatgctcaaaaatggagaatttcaagatacctatgaccga
gatcgtcgtcaaaaccgtgagaaatcttatcaaaaattagacacggaaatgattggtttg
gtgaagaagaaaaagaaaaaagtcaaaccaggttataagaaaaaaattcagtgggcggtt
gatgaaaaacgtcgcaaagaacgtcgcgctgaaaaccgtgccaaaggccgtgccgagcgt
aaggctaaaaaacaaagtttttaa
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