Streptococcus dysgalactiae subsp. equisimilis RE378: GGS_1711
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Entry
GGS_1711 CDS
T02269
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sda
Streptococcus dysgalactiae subsp. equisimilis RE378
Pathway
sda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GGS_1711 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sda03400
]
GGS_1711 (recD)
Enzymes [BR:
sda01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GGS_1711 (recD)
DNA repair and recombination proteins [BR:
sda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GGS_1711 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
DEAD
AAA_22
AAA_12
nSTAND3
AAA
TsaE
NPHP3_N
DUF815
AAA_16
HHH_5
AAA_28
AAA_7
UvrD_C
Zeta_toxin
NACHT
AAA_14
SLFN-g3_helicase
Rad17
5_3_exonuc
RsgA_GTPase
NAT10_TcmA_helicase
AAA_29
AAA_5
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BAM61829
LinkDB
All DBs
Position
1845256..1847709
Genome browser
AA seq
817 aa
AA seq
DB search
MEHFFTGTVDRIIFENAANFFKILLLAIEDTDSDIDDFEIIITGTMADIIEGDDYTFWGE
LTQHPKYGQQLKLSRYQKVKPSSSGLVNYFSSDHFKGIGKKTAEKIIALYGNNTIDHILE
DPSKLETISGLSKANRQAFVAKLKLNYGTEQLIAGLVELGLSNRFAFQAFEKYKEEALDL
VKENPYQLVEDLQGFGFKMADALAENLGIESDSPKRFRAALLHCLLEESVSRGDTYVQAR
QLLDFAITLLEDARQVECDPAAVAEQLSELIIEGKIKNSDTKLFDASLYFAEEGIAKNIS
RLLDTPLSQSFSHDTIQTTIQAVQEDFAITYDQVQQEAIAKALTSKVFLLTGGPGTGKTT
VIRGILQAYANLHQIDLDKKDLPILLAAPTGRAARRMNELTGLPSATIHRHLGLNGDNDY
QAMEDYLDCDLLIVDEFSMVDTWLANQLLAAISSTTQVIIVGDSDQLPSVGPGQVLSDLL
KVNSLPQIALQKIFRQSQESTIVDLADQMRRGILAADFRDKKADRSYFEAQASFIPDMIQ
KIVLSAIKSGIPAEEIQILAPMYKGQAGINHLNQLMQNLLNPLEGQTEFLFNDTHFRKGD
KVLHLVNDAQLNVFNGDIGYITDLIPAKYTESKQDELILDFDGSEVTYPRNEWLKLTLAY
AMSIHKSQGSEFQVVILPITRQSGRLLQRNLIYTAITRSKSKLIMLGEFAAFDYAIKNEG
DKRQTYLVERFQEQSDLASSQPNQELKSKEQTSLFSNTAALEDDSQKSSSQSTNSNPTEN
SQSDNDDFRLTPENYSTIDSMIGLTESDIALFFQKKS
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggaacacttttttactggtactgttgaccgcattatctttgaaaatgcagctaatttt
tttaaaattctcctccttgccatcgaagacacagatagtgatattgacgactttgaaatc
attatcacagggacgatggctgacattattgaaggagatgactacaccttttggggggaa
ttgacccagcaccctaaatatggacagcaactcaaactaagccgttaccaaaaagtcaaa
cctagttcatctggtttggttaattatttctccagcgaccattttaaggggattggaaag
aaaacagcggagaaaatcattgccctctatggcaataatactattgaccatattttagaa
gacccaagtaaattagaaactatttctggtctgtccaaagctaatcgtcaagcctttgtc
gctaaactgaaattgaattatggcacagagcaactgattgctggtctcgtcgaacttggc
cttagcaaccgttttgcctttcaagcgtttgagaagtacaaagaagaggctcttgacctt
gttaaagaaaatccctatcaattagtcgaagatctacaaggttttgggtttaagatggca
gatgctctcgctgaaaacttagggattgagagcgactctccaaaacgttttcgtgctgcc
ctcctgcactgcctcttggaagaatccgtcagtcgaggagacacttatgtccaagcacga
caattattagactttgccatcacactccttgaagatgcacgtcaagtagaatgtgaccct
gctgctgtggctgaacaactaagcgagttaatcatagagggcaaaatcaaaaacagtgac
accaaattgtttgatgctagcctttattttgctgaagaggggattgctaagaatatctct
cgtctcttagatacccctttaagtcagtcatttagtcatgataccatccaaacaaccatc
caagccgttcaagaagactttgctatcacttatgaccaggtgcagcaagaagccattgct
aaagccttaaccagcaaggtatttctcctaacaggtggtcccggaacagggaaaacaact
gttattcgaggcattttgcaggcttacgcgaacctgcatcagattgatttggataaaaaa
gaccttcctatcttgttagcagctccaacaggtcgggctgcacgtcgtatgaatgagttg
actggacttcctagcgcaaccatccacaggcacttaggcctcaacggcgacaacgattac
caagccatggaagattatctagactgcgacttgctgattgtcgatgaattttcaatggtg
gatacctggcttgctaaccaattgttagcagcgattagttcaacaactcaagtaattatt
gtcggagatagtgaccagcttccttcggttggacccggtcaagtcctgtcagatctttta
aaagtcaatagcctgccccaaatcgccttgcaaaagatatttcgtcaatcccaagaatct
actattgtagatttggcagaccagatgcgtcgaggaatcttagctgctgactttcgtgac
aaaaaagctgaccgttcttattttgaagcccaagcctctttcatcccggacatgattcaa
aaaattgttctatctgctattaaaagtggcatccctgctgaggaaattcaaattttagcg
cctatgtacaaaggacaggctggcatcaatcatcttaaccaattgatgcaaaacctcctc
aaccctttggaagggcaaacggaatttctgttcaatgatacgcattttcgtaaaggtgat
aaagtcttgcacttagtcaacgatgctcagttgaatgtctttaacggagatattggttat
attacagatttgattcctgctaaatataccgaatctaagcaagacgaattaatcttagat
tttgacggtagcgaagtcacgtaccctagaaatgaatggctaaaattaaccttagcctat
gccatgagcattcataagtcacaagggagcgagtttcaagtggtgattttacccatcaca
cgccaaagcggccgacttttgcaacgaaatttaatttatactgctatcacccgttctaaa
agtaagttgattatgctaggtgaatttgcagcctttgactatgctattaaaaatgaaggg
gataaacggcaaacttatttggtggaacgcttccaagaacaatccgacttagcctcctct
caacctaaccaagagctaaaatcaaaagagcagacctcccttttttctaatacggcagcc
cttgaggacgactctcaaaaatcttcctctcaatcaacaaactctaaccccactgagaac
tctcagtcagataatgatgattttaggttaacacctgagaattattcgactatcgattcg
atgatagggcttacagagtcagatattgccctctttttccagaaaaaatcctag
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