Staphylococcus debuckii: CNQ82_04615
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Entry
CNQ82_04615 CDS
T07127
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sdb
Staphylococcus debuckii
Brite
KEGG Orthology (KO) [BR:
sdb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdb03400
]
CNQ82_04615 (addB)
Enzymes [BR:
sdb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CNQ82_04615 (addB)
DNA repair and recombination proteins [BR:
sdb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CNQ82_04615 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AYU54747
LinkDB
All DBs
Position
989745..993215
Genome browser
AA seq
1156 aa
AA seq
DB search
MSELNAYIGRAGTGKSHAMLDEIKTKMKEDPLGDPIIIIAPTQSTFQLEQDFVKDPDLNG
SMRTEVLHFERLSHRIFQEIGGLTEDYASKGALEMMVFDILQSHRSELNLYQSQTKYYGF
SAKLSEQIQDFKKYAVSPAQLEQFIAEDQLQTRTQDKLHDIALVYHYLEERLADNFVSSE
DTLYKFIEKMDESAWLKKSEIYIDGFHNFSTLEYQIIEKLSQCAKSVSVLLTTDGDKDPF
SLFRKTSATLSHIEEIAQRQQIPFNLRRFTSQERFENRDLSHLESTFNELFFEKAKVEGH
INILEASNVREEVNAVAREILRKAREENIRYQDVAILYRDDTYAHLMESVFPEFEIPFNV
DTKKSMTHHPVMEMIRSLLEVIETKWSFEPLMRLFKTQVLTKEFKDSRYLIDILENYVLE
RGIYGQRWLDDKYFKLEQFNQMGLKRQPMTEETQQVYQRVIDMKNFVIDKILRFEKALSE
AETAEEYAAAFYEVFEEFNLPSQLMTERDELDLAGEHEQAEELDQVWNGFIQTLDDLATV
FGDREMTQKRFLELFDVGLEQLEFVMIPQTLDQVSIGSMDLAKVDNKKQIYMLGMNDGVM
PQTISNSRLISDDEKKYFQEETQLELSPTADVLQMDEAFVCYIAMTRATTDVTFSYSLMG
LSNDEKEVSPFINNIRDLYTNLDVLNVQYAAQYNPLRVMEHPHQTKILLFEELQGWLNHE
LTAETWLEAYQAMLYNERLNKGLQYLTSALTFDNKTVQLDTSLSKALYGDKINASVSRFE
GYQQCPFKHYTSHGLRLNERTKYKLENFDLGDIFHSVLKYIADRIHGDFRNLTDASIRQL
TQEALENILPEVQYNLLNSSAYYRYMSVRIGAIVQSTLTALKYQGTFSKFKPQAFEKSFR
KNPNSNEQLAAESLYTSQGIPINIRGQIDRIDTYTNQDRSFVNIIDYKSSEYSGTLDLTK
VYYGLQMQMMTYMDVVLQNKARLNLAESTEPGGLLYFHVHEPRVNFANWAEMDEVKRQEE
LLKSFRLNGLINSDPEVVDAEDTRLEPKFKSDIVPIDVGAKGNLNKSSKVADSKTIYKFI
EHNKNNFVQIASDIMDGHTEVAPMKYKQKLPCEFCNYRSVCHVDGMIDSKKYRTVDESIN
PIDLLNQTSDEEEETE
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaattaaatgcatatatagggcgagcaggaactggtaagtctcatgctatgtta
gatgaaattaaaactaaaatgaaagaagatccgcttggagatccgattattattattgca
ccaacgcaaagcaccttccaattagaacaagatttcgtgaaagatccagaccttaatggc
agtatgcgtactgaggttttacactttgaacgcttaagtcatagaatatttcaagaaata
ggcggtttgacagaagactatgcttctaaaggcgctttagaaatgatggtctttgatatc
ttgcaatcacaccgttctgaattgaatttataccaatctcaaactaaatactatggattt
agtgctaaattaagcgaacaaattcaagattttaaaaagtatgctgtttctcccgcacaa
ctcgaacagtttattgctgaagatcaactgcaaacaagaacacaagataaattacatgat
attgcacttgtttatcattatttggaagagcgtttggctgataatttcgtttcttctgaa
gacacactttataaatttattgagaagatggatgaatcagcatggctgaaaaagtcagag
atttatatcgatggtttccataacttttcgacgcttgaatatcaaattatagaaaaacta
tcgcaatgcgctaagtctgtcagtgtgctgcttactacagatggagataaagatccgttc
agtcttttcagaaaaacttcagcgacactgtcacatattgaagaaattgcgcaacgacaa
caaattcctttcaacttacgtcgttttacaagtcaagaacgctttgaaaatcgagattta
tctcatttagaaagtactttcaatgaactcttttttgagaaagcgaaggtagaagggcat
attaatattctcgaggcttcaaatgttcgcgaagaagtaaatgcggtagcacgggagatt
ctgcgtaaagcacgtgaggaaaatatacgttatcaagatgtagcgattctctatcgtgat
gacacttatgcgcatttaatggaaagtgtctttccggaatttgaaattccctttaatgtt
gataccaagaaatcgatgacgcatcatccggtaatggagatgatccgttcattattagaa
gtgattgaaacaaaatggagtttcgaacccttaatgcgtttgtttaagactcaagtgctg
acgaaagaatttaaagatagtcgttatcttatcgacatcttagaaaactatgtattagaa
cgtggtatttatggtcaacgctggttagacgataagtactttaaacttgagcagtttaat
caaatgggtctgaagcgtcaacctatgacagaggaaacacaacaagtctatcaacgcgtt
atagatatgaagaactttgtgatagataaaatcttgcgttttgaaaaagcgttgagtgaa
gcggaaactgcagaggagtacgcagctgctttctatgaagtatttgaagaattcaatttg
ccgagtcaattaatgacagagcgagatgaattagatttagctggggaacatgaacaagct
gaagaattggaccaagtatggaatggctttattcaaacattggatgacttagctactgtc
ttcggcgatagagaaatgacacagaagcgtttccttgaactctttgatgtaggtttagag
caattagaatttgtgatgattcctcaaaccctagatcaagtaagtatcggcagtatggac
ttggctaaagtagataataaaaagcaaatttatatgttaggtatgaatgatggggtaatg
cctcaaacaatttctaattctagattaatcagtgacgatgagaaaaaatacttccaagaa
gagacgcaacttgagttgagcccgactgctgacgttttacaaatggacgaagcattcgtg
tgttatattgcaatgacaagagcaacgactgatgttactttttcttatagtttaatgggt
ctcagcaatgatgaaaaagaggtcagtccgtttattaataatattcgagacctgtacact
aatttggatgtattaaatgtacaatatgccgcgcaatataatccgttgagagtaatggaa
catccgcatcaaaccaaaattctgttgttcgaagaattgcaagggtggctgaatcatgaa
ttaactgctgagacttggttagaagcttatcaagcaatgctgtataatgagcgcttgaat
aaaggattgcaatatttgacatctgccttaactttcgataacaaaacagtacaattagat
acctctttatcgaaagctttatatggagataaaatcaatgccagcgtctcgcgatttgaa
ggttatcagcagtgtccattcaagcactatacttctcatgggttacgtctaaatgagcgt
acaaaatataaattagagaactttgatttaggagatatcttccactcggtattgaaatat
attgctgatagaatccacggcgatttccgcaatctcacagatgcttctatccgccaattg
acacaagaagctctagaaaatatcttgcctgaagttcaatacaacttgttgaactcttca
gcatattatcgttatatgtcagtacgtatcggggcaatcgtgcaatcgactttaacagca
ttaaaatatcaaggtactttttctaaattcaaacctcaagcttttgaaaaatcttttaga
aaaaatcctaactctaatgagcagctcgcagcagaatcactatatacctctcaaggtata
ccgataaatatccgtggccaaattgatcgtattgatacgtataccaatcaagaccgcagt
tttgtgaatataattgactacaaatcatcagaatacagcggaactttagatttaacgaaa
gtctactacggactgcaaatgcagatgatgacctatatggatgtggtactgcaaaataaa
gcacgcttaaatttagcagaatctacagaaccaggaggcttattatatttccatgtgcac
gaaccgcgggttaattttgccaattgggctgagatggatgaagtaaaaagacaagaagaa
ttgttgaaatccttcagattaaatggattaatcaatagcgatcctgaagtcgttgatgct
gaagataccagattagaacctaaattcaagtcagacattgtcccaatagacgtaggcgca
aaaggtaatttgaataagagcagtaaagttgcagattcgaaaaccatttataaatttatt
gaacataataaaaataacttcgtgcagattgcttcggatattatggatggacacactgaa
gtggcacccatgaaatataaacagaagctaccttgcgaattttgtaattatcgttctgtg
tgtcatgttgatgggatgatagatagtaagaaatatagaacagtagatgaaagtattaat
ccgattgatttattaaatcaaacatcagacgaagaggaggaaactgaatga
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