KEGG   Staphylococcus debuckii: CNQ82_05295
Entry
CNQ82_05295       CDS       T07127                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sdb  Staphylococcus debuckii
Pathway
sdb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sdb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CNQ82_05295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdb03019]
    CNQ82_05295
Messenger RNA biogenesis [BR:sdb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CNQ82_05295
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: AYU54875
LinkDB
Position
complement(1137275..1139206)
AA seq 643 aa
MKQLKNNEVGVYALGGLGEVGKNTYAVEYKDEIVLIDAGIKFPDDNLLGIDYVIPDYSYL
VQNKDKIIGLFITHGHEDHIGGVPFLLKELNIPIYGGPLALGLIRNKLEEHHLLRTAELH
EINEDTEIDSKYFNISFYLTTHSIPEAYGVIVDTPEGKIVHTGDFKFDFTPVGTPANIAK
MAKIGEEGVLCLLSDSTNALVPNFTLSEREVGQNVDKIFRKCTGRIIFATFASNIYRVQQ
AVEAAIKYNRKIVVFGRSMENNIKIGMELGYIKAPPETFIEPSKINSVPKHELLILCTGS
QGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINALYRAGADVIHSKI
SNIHTSGHGSQGDQQLMLRLIQPKFFMPIHGEYRMLKAHSQTGIQCGVDEDNVFIFDNGD
VLALTRDSARKAGRIPSGDVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFNTNTL
LSGPDIISRGFVYMRESGHLIYDAQRRIKTDVISKLNQNKDIQWHQIKSSIIETLQPYLY
EKTARKPMILPVIMKVNEDGEQITKPSKSKSNSRPKKNNSKVKSSNKNNDSKNNQGGRPA
KRNTNGRKPQSKNNKPQAKNESGSKQEPSSQAKSKNKSDSNKE
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgaaacaattaaaaaataatgaggtcggcgtatacgcgcttggcggacttggtgaagtc
ggcaagaatacgtatgcagtcgaatataaagatgagattgtcttgattgatgcagggatt
aaatttcctgatgacaatttattggggattgactatgtcatccctgattattcttatctt
gtacaaaacaaagataagattatcggacttttcatcacacatggacatgaagaccatatc
ggcggtgtgcccttcttacttaaagaacttaatataccgatttatggtggccctttagca
cttggattaatccgcaataaacttgaagagcaccatttgcttagaactgctgagttgcat
gaaattaatgaagacacagaaattgattcgaaatatttcaatatctcattttatctgact
actcacagtattccggaagcttacggtgtcatagttgatacaccagaaggtaaaatcgtg
catacaggtgacttcaaatttgattttaccccagtaggaactcctgcgaatattgctaaa
atggcaaaaattggagaagaaggtgtgctttgtcttctttctgattctactaatgcttta
gtgcctaactttactttgagcgaacgtgaagtaggacaaaacgttgacaaaattttccgt
aaatgtacaggcagaattatttttgctacatttgcttctaatatttaccgtgtgcaacag
gcagttgaagctgcaatcaaatataatcgcaaaattgtagttttcggccgttcaatggaa
aataatattaaaatcggtatggaattaggctatatcaaagcaccaccagaaacttttatt
gaaccaagcaagatcaattctgtgccaaaacacgaattgttgattttatgtacaggttct
caaggtgaaccgatggctgccctttcaagaattgcgaatggaacacacaaacaaattaaa
attattcctgaagatacagtggtattcagttcatcacctattcctggtaacactaaaagt
attaaccgtacaattaatgcgttatatcgtgcaggtgcggatgttattcatagtaaaatt
tctaatatccacacttccggacacggatctcaaggtgatcaacaattaatgttacgcttg
attcaacctaaattctttatgccgattcatggtgaataccgtatgttaaaagcacactcg
caaacaggtattcaatgcggcgtcgacgaagataatgtgtttatctttgataacggcgat
gtattggcattgacgagagattctgcacgtaaagcaggacgtatcccttctggtgatgtt
ttagttgatggaagcggtatcggcgatattggtaatgtcgtcattcgtgaccgtaaactc
ttatctgaagaaggtttagtaatcgtagtagtaagtattgatttcaacactaatacatta
ctttctggtcctgatattatttctcgcggattcgtttatatgcgtgaatcaggtcattta
atttacgatgcgcagcgtagaattaaaactgatgtcatcagtaaattaaatcaaaataaa
gatattcaatggcatcaaatcaaatcatcgattattgaaacattacaaccttatctttat
gagaaaacagcacgtaaaccgatgattttacctgttattatgaaagtaaatgaagatggc
gaacaaataactaagccatctaaatctaaatcaaattcaagacctaagaaaaataattct
aaagttaaatcatctaataaaaataatgattccaaaaataaccaaggtgggcgtccagca
aaacgtaatactaatggacgaaagcctcagtctaaaaataataaaccacaagctaaaaat
gaatcaggttctaagcaagaaccatcatctcaagcaaaatcaaaaaataaatctgattct
aataaagaatag

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