Staphylococcus debuckii: CNQ82_06275
Help
Entry
CNQ82_06275 CDS
T07127
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sdb
Staphylococcus debuckii
Brite
KEGG Orthology (KO) [BR:
sdb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdb03032
]
CNQ82_06275 (topA)
03400 DNA repair and recombination proteins [BR:
sdb03400
]
CNQ82_06275 (topA)
Enzymes [BR:
sdb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CNQ82_06275 (topA)
DNA replication proteins [BR:
sdb03032
]
Prokaryotic type
DNA Topoisomerases
CNQ82_06275 (topA)
DNA repair and recombination proteins [BR:
sdb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CNQ82_06275 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Cys_rich_CPXG
Motif
Other DBs
NCBI-ProteinID:
AYU55063
LinkDB
All DBs
Position
1333628..1335697
Genome browser
AA seq
689 aa
AA seq
DB search
MADNLVIVESPAKAKTIEKYLGKRYKVIASMGHVRDLPRSQMGVDVEDDFEPKYITIRGK
GPVVKELKRHAKKAKKIFLASDPDREGEAIAWHLANILDLDENAKNRVVFNEITKDAIKE
SFKTPRGIELNLVDAQQARRIVDRLVGYNISPVLWKKVKKGLSAGRVQSLALRLIIDREN
EIRNFKPEEYWKIEGNFRYKKSTFSAKFLHYKNKPYKLNNKDDVKFITDQLDGNEFEVTK
VTKKEKKRNPANPFTTSTLQQEASRKLNFKARKTMMIAQQLYEGIDLKKQGTVGLITYMR
TDSTRISAGAKAETKEFITEKYGKDYISHRKAAAGKQGDQDAHEAIRPTKTLRTPADMKP
YLTRDQYRLYKLIWDRFVASQMAPAVLDTVAMDIEQKDVKFRANGQTIKFKGFMTLYVES
KEGEEEKNNKLPVIAEGEKVTATDIEPTQHFTQPPPRFTEARLVKTLEELKIGRPSTYAP
TLDTIQKRNYVKMESKRFVPTELGEIVHEQVKEYFPEIIDVDFTVNMETLLDKIAEGDIK
WREVVGNFYGGFEKDVERAEQEMEKIEIKDEPAGEDCEVCGSPMVIKMGRYGKFMACSNF
PDCRNTKAIVKEIGVKCPKCDDGQVVERKSKKGRVFYGCSNYPECDFISWDKPVGRSCPK
CDHYLVERKKGRSSQVICSNCDYKEEVQK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
ttggctgataatttagtcatagttgagtcgcctgcaaaagctaaaacaattgaaaaatat
ttagggaaaagatataaagtaatcgcatcaatggggcatgtcagagatttgccaagaagc
caaatgggcgttgatgttgaagatgattttgaacccaaatatattactattcgcggcaaa
ggaccggtcgtaaaagaattaaaaagacatgctaaaaaagcaaagaaaatctttttagcg
agtgaccccgaccgtgaaggagaagcgattgcatggcacttagcgaatatcttagattta
gatgaaaatgcaaagaatcgtgtagtatttaatgaaatcactaaagatgcaataaaggaa
agttttaagacaccaagaggaattgaattgaacctcgttgatgcacagcaagcacgccgt
attgtagatagacttgtgggttataatatttctccagtgttatggaagaaagttaaaaaa
ggtctgtcagcaggtcgtgtgcaatctttagccttacgtcttattattgaccgtgaaaat
gaaatcagaaactttaaaccagaagagtattggaaaatcgaaggtaatttccgttataag
aaatctacttttagtgccaaattcttacattataaaaacaaaccttataaattaaataat
aaagatgacgtcaagtttattactgatcaattagacggtaacgaatttgaagtgactaaa
gtaacgaagaaagagaaaaagcgtaatccagctaatccttttacgacttctacacttcaa
caagaagcttctagaaagttgaacttcaaagctagaaaaacgatgatgattgcacagcaa
ttatatgaaggtattgatttgaagaaacaaggtacagttggtttgattacgtatatgcgt
accgattcaacacgtatttcagcaggcgccaaagccgaaacgaaagaatttattactgag
aagtacggtaaagattatatctctcatcgtaaagcagcggcaggtaaacaaggcgatcaa
gatgcccatgaggcgattcgcccaacgaagacattacgtacacctgctgacatgaaacca
tacttaacacgtgaccaatatcgcctctataaattaatttgggaccgcttcgtagcaagt
caaatggcacctgcagttctagatactgtagctatggatattgaacaaaaagacgtgaag
ttccgtgccaacggacaaacgattaaatttaaaggattcatgactttatatgtagaatcc
aaagaaggagaagaagagaagaacaataaacttccagtgattgcagaaggtgaaaaggta
acagctacagatattgaaccgacacaacactttacacaaccacctccaagatttactgag
gcgcgtttagttaaaacgttggaagaattgaaaatcggacgaccttctacgtacgcaccg
actttggatactattcaaaaacgtaattacgttaaaatggaaagcaaacgctttgttcca
actgaacttggtgaaatcgtgcatgaacaagtgaaagaatacttcccagaaataatcgat
gttgatttcactgtaaatatggaaacattattggataaaattgctgagggcgacattaaa
tggagagaagttgtcggtaatttctacggcggtttcgaaaaagatgtcgaacgtgctgag
caagaaatggaaaaaattgaaattaaagatgaacctgccggcgaagattgtgaagtatgc
ggttctccaatggtaattaaaatgggtcgttatggtaaattcatggcatgttcaaacttc
ccggattgccgcaatacgaaagcaatcgtcaaagaaatcggcgttaaatgtccgaaatgt
gatgatggccaagtcgttgaacgtaaatctaaaaaaggcagagtcttctacggctgctct
aattatcctgaatgcgactttatctcatgggataaaccagtcggcagaagctgtccaaaa
tgcgaccattatttagtagaacgtaaaaaaggccgctcaagccaagtaatttgttcaaat
tgtgattataaagaagaagttcaaaaatag
DBGET
integrated database retrieval system
