Staphylococcus debuckii: CNQ82_06405
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Entry
CNQ82_06405 CDS
T07127
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sdb
Staphylococcus debuckii
Pathway
sdb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNQ82_06405 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdb03019
]
CNQ82_06405 (pnp)
03016 Transfer RNA biogenesis [BR:
sdb03016
]
CNQ82_06405 (pnp)
Enzymes [BR:
sdb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CNQ82_06405 (pnp)
Messenger RNA biogenesis [BR:
sdb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CNQ82_06405 (pnp)
Transfer RNA biogenesis [BR:
sdb03016
]
Prokaryotic type
tRNA degradation factors
CNQ82_06405 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_2
SPATA25
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AYU55087
LinkDB
All DBs
Position
1362844..1364949
Genome browser
AA seq
701 aa
AA seq
DB search
MSQEKKVFKTEWANRPLSIETGQMAKQANGAVLVRYGDTVVLSTATASKEPRDGDFFPLM
VNYEEKMYAAGKIPGGFKKREGRPADEATLTARLIDRPIRPLFPKGYRHDVQIINMVLSA
DPDCSPEMAAMIGSSMALSVSDIPFQGPIAGVNVGYIDGEYVINPTVEQKEVSRLDLEVA
GHKDAVNMVEAGASEITEKEMLDAIFFGHEEIKRLVDFQQEIIDYLQPEKTEFIPKERDT
AVEEKVTALTEEKGLKDAIQTFDKKEREENIDAIRDEVIAEFDDEENPDNEEVLAEVNAI
LNDLVKEEVRRQIADDKIRPDGRKPDEIRPLDSEVGLLPRAHGSGLFTRGQTQALSVLTL
GAMSEYQLIDGLGTEQEKRFMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALRYIIP
DTKDFPYTVRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTRDDNYT
ILTDIQGMEDALGDMDFKVAGTEKGITAIQMDIKIDGLTREIIEEALEQARVGRLTILNH
MLETIDQPRPELSAYAPKVETMTIKLEKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIF
IGSVDQDMINRAREIIEDITREAEVGQVYNAKVRRIEKYGAFVELFPGKDALLHISQIAN
QRINKVEDVLKMGDTIEVKVTEIDDKGRVNASHRALLNKED
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaaaagaaagtgtttaagactgaatgggccaaccgaccattatcgatagaa
actggacaaatggcgaaacaagcaaatggggcggtacttgtacgttatggcgacacagtt
gtattatctacagccactgcatcaaaagaaccccgtgacggtgatttcttcccattaatg
gtcaactatgaagaaaaaatgtatgcggcaggtaaaattcctgggggctttaagaaacgt
gaagggcgcccggctgacgaagctacattaactgcacgcttaatcgatagaccgattcgt
cctctattccctaaaggttatagacatgacgttcaaattattaatatggtattgagtgca
gaccctgattgctcacctgaaatggcagcgatgattggttcatctatggcattgagtgtt
tctgatattccattccaaggtccgattgcaggtgtcaacgttggttatattgatggcgaa
tatgtcattaacccgacagtagaacaaaaagaagtttcacgtttagatttagaagttgcc
ggtcataaagacgcggtaaacatggttgaagctggcgcaagcgaaatcactgaaaaagaa
atgctagacgcaatcttctttggtcatgaagaaatcaaacgcctagttgacttccaacaa
gaaattattgattatcttcaacctgaaaaaacggaattcattcctaaagagcgtgatact
gcagttgaagaaaaagtcacagctttaaccgaagaaaaaggattaaaagatgccatccaa
actttcgataaaaaagaacgtgaagaaaatatcgatgcaattcgtgacgaagtcattgct
gaatttgatgacgaagaaaatccagataatgaagaggtactcgctgaagttaacgctatc
ttaaatgatttagtgaaagaagaagtacgtcgtcaaatcgctgatgacaaaatccgtcca
gatggtcgtaaaccagacgaaattcgtccacttgattcagaagtaggtctattacctcgt
gcgcatggctcaggattattcacacgtggtcaaacacaagcactttctgtattaacatta
ggtgcaatgagtgagtatcaattaattgatggtttaggtacagaacaagaaaaacgcttt
atgcatcactataacttcccgaatttctcagttggggaaacaggtccagtgcgtgcacca
ggacgtcgtgaaattggacatggtgcattaggtgaacgtgcattgcgttatattattcct
gatactaaagacttcccatatactgtacgtattgtcagtgaagtattagaatctaatggt
tcttcatcacaagcatcaatttgcggctctacgcttgcattaatggatgccggtgtgcca
atcaaagcacctgtagcgggaatcgcgatgggtctagttacacgtgatgataactatacg
attttaacggatatccaaggtatggaagatgctttaggcgatatggactttaaagtagca
ggtactgaaaaaggtattacagctatccaaatggatattaaaattgatggtttaacacgt
gaaattatcgaagaagctttagaacaagcgcgtgtaggtcgtttgacaatcttaaatcat
atgcttgaaacaattgatcaaccacgtcctgaattaagtgcatatgcacctaaagtagaa
acaatgactatcaaacttgagaaaatcagagatgtgattgggcctggcggtaagaaaatc
aatgaaatcattgatgaaacaggcgttaaattggatattgaacaagatggaaccatcttt
atcggttcagttgatcaagatatgattaaccgtgcacgtgaaattatcgaagatattaca
cgtgaagcggaagtcggccaagtttacaatgcgaaagtaagacgtattgaaaaatacggt
gcatttgtagaacttttcccaggcaaagatgctttattacacatttctcaaatcgcaaat
caacgtatcaacaaagttgaagatgtattgaaaatgggagatacgattgaagtcaaagtt
actgaaatcgatgataaaggcagagtaaatgcttcccaccgcgctttattaaataaagaa
gattaa
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