Staphylococcus debuckii: CNQ82_06465
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Entry
CNQ82_06465 CDS
T07127
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sdb
Staphylococcus debuckii
Pathway
sdb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNQ82_06465 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdb03019
]
CNQ82_06465 (rny)
Messenger RNA biogenesis [BR:
sdb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CNQ82_06465 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
ATP-synt_B
DUF6556
DUF7669
KH_2
YtxH
Motif
Other DBs
NCBI-ProteinID:
AYU55099
LinkDB
All DBs
Position
1378266..1379825
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AA seq
519 aa
AA seq
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MNLLTLLLILLGCILGVVVGYIAAQKVLHEKQVQAKQTADDIINQANKEADNLKKERLLE
AKEENQRLKEQTENELREIRGNLQKQEARLLQKEDNLERKSDLLDKKDEILEQKESKIEE
KQQQVDAKESSVQSIIMKHEQELERISGLTREEAINEQFQRVEEELSQDIAVLVKEKENE
AKEKVDKSAKELLATAVQRLAAEHTSESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIARTTLVNLVSDGRIHPGRIEDMVEKARKEVDDIIRD
AGEQATFEINVHNMHPDLVKILGRLKFRTSYGQNVLKHSIEVAHLSGMLAAELGEDVTLA
KRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYHENETVINAIHSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIRRLERLEALSESYEGVEKAFAIQAGREIRVIVSPEEIDD
LKAHRLARDIKKQIEDELQYPGHIKVTVVRETRAIEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttattaactctcctactcattttgctggggtgtattctaggagttgttgtaggg
tatatagcagcccaaaaagttttgcatgagaaacaagttcaggcaaaacaaactgcagat
gatattatcaatcaggcaaacaaagaagcagataatctcaagaaagagagattacttgag
gctaaagaagaaaatcaacgtttaaaagagcaaacggaaaatgaacttcgtgaaatacgt
ggtaatcttcaaaaacaagaggcccgacttcttcaaaaagaagataacttagagcgtaag
tctgatctgttagataagaaagatgagattttagagcaaaaagaatcgaaaattgaagaa
aaacaacaacaagtagatgcaaaagagagtagtgttcaatcaataataatgaagcacgaa
caagaattagaacgcatctccggtctcacacgcgaagaagcaatcaacgaacaattccag
cgtgttgaagaagaactgtcacaagatattgcagtacttgttaaagaaaaggaaaatgaa
gcgaaagaaaaagttgataaatcagcaaaagaattattggctactgctgtacagcgatta
gcagctgaacatacatcagagtcaacagtatcagttgtaaacttgcctaatgatgaaatg
aaaggtcgaatcattggacgtgaaggccgaaatattcgaacattagaaacattaacaggt
attgatttaattattgacgatacgccagaagctgttatcctatctggctttgatccgatt
cgacgagaaattgcacgtacaactttagtcaatctagtttcagatggacgtattcatcca
ggacgtattgaagatatggttgaaaaagcacgtaaagaagtagatgatattatccgagat
gctggtgaacaagcaacatttgaaattaatgttcataacatgcatcctgatttagttaaa
atcttaggtcgtttaaaattcagaacaagttatggccaaaatgtattaaaacactctata
gaagtggcgcacttatcaggtatgcttgcagcagagcttggtgaagatgtgacattggct
aaacgtgctggtttattacatgatgtaggtaaagctattgaccacgaagtcgaaggcagt
catgtagaaatcggtgtagaacttgctaagaaataccatgagaatgaaacagttatcaat
gcgattcattcacatcatggcgatgtagaaccgacatcaattatctctatcttagtcgca
gcagcagatgcactatctgcagcgcgtccaggtgctcgtaaagaaacacttgaaaactat
attagaagactagagcgtttagaagctctatctgaaagttatgagggtgttgaaaaagca
ttcgcaatacaagcaggtagagaaatcagagtcattgtatctcctgaagaaatcgatgat
ctaaaagcacatcgtttagcaagagatattaaaaaacaaatagaagatgaactacaatat
ccaggacatattaaagtgacagttgttcgtgagacgagagcaattgaatatgcgaaataa
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