Staphylococcus debuckii: CNQ82_07750
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Entry
CNQ82_07750 CDS
T07127
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sdb
Staphylococcus debuckii
Pathway
sdb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sdb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CNQ82_07750 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdb03021
]
CNQ82_07750 (rpoD)
Transcription machinery [BR:
sdb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CNQ82_07750 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
AYU55350
UniProt:
A0ABU9EZE8
LinkDB
All DBs
Position
complement(1644222..1645331)
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AA seq
369 aa
AA seq
DB search
MSENQVKVVKKQTIDPTLTLEDVKKQLLEKGKKEGHLSHEEIAEKLQNFEMDSDQMDEFF
DQLNDNDINLVNEKDSSDTDEKLNPHDLSAPPGVKINDPVRMYLKEIGRVNLLNAQEEIE
LAKRIEQGDEVAKARLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFSK
GFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEI
GEEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEVQSPSDHAAYELLKEQ
LEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSR
SKRLKDFMD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaccaagtgaaagtagtaaaaaaacaaaccatcgatccgacattgactttg
gaagatgtaaaaaaacaattattagaaaaaggtaaaaaagaaggtcatcttagtcacgaa
gaaatagctgaaaaattacagaatttcgaaatggattctgaccaaatggatgaattcttt
gaccaattaaatgataatgatatcaatcttgtcaatgaaaaagacagctcagatacagac
gaaaaattaaatcctcacgatttgagtgcacctccaggagtaaaaattaatgaccctgta
cgtatgtatttgaaagaaatcggacgcgttaatttattaaacgctcaagaagaaattgaa
ttagcaaaacgtattgaacaaggagatgaagtagctaaagcaagattagctgaagccaac
ttacgtttagtagtcagtatcgctaaaagatatgtcggccgtggaatgctattcttagat
ttaatccaagaaggtaacatgggcttgattaaagctgttgaaaagttcgatttcagtaaa
ggatttaaattttcaacatatgctacatggtggattcgtcaagcgattacacgtgctatt
gctgaccaagcacgtacgattcgtattccagtacacatggtggaaacaattaataaatta
attcgtgttcaaagacaacttcttcaagatttaggcagagatcctgctccagaagaaatt
ggggaagaaatggacttaccaccagaaaaagtacgtgaaattttaaaaatcgctcaagaa
cccgtttctttagaaactcctatcggcgaagaagacgacagtcatttaggtgactttatc
gaggaccaagaagttcagagcccatctgatcatgccgcttatgaactattaaaagaacaa
ttagaagatgttctggatacactcactgatagagaagaaaatgttctaagattgcgtttt
ggtttagacgacggaagaacacgcacacttgaagaagtcggtaaagtattcggcgttaca
agagaacgtattcgtcaaatcgaagccaaagcattaagaaaacttagacatcctagtcgc
agtaaacgactcaaagatttcatggactaa
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