Staphylococcus debuckii: CNQ82_08065
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Entry
CNQ82_08065 CDS
T07127
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sdb
Staphylococcus debuckii
Pathway
sdb03410
Base excision repair
sdb03430
Mismatch repair
sdb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CNQ82_08065 (recJ)
03430 Mismatch repair
CNQ82_08065 (recJ)
03440 Homologous recombination
CNQ82_08065 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdb03400
]
CNQ82_08065 (recJ)
DNA repair and recombination proteins [BR:
sdb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CNQ82_08065 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CNQ82_08065 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CNQ82_08065 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AYU55411
LinkDB
All DBs
Position
complement(1705898..1708174)
Genome browser
AA seq
758 aa
AA seq
DB search
MIKAKFKWDLKQNSKEISEQVVSEMKITSIVQKILESKNIIEKEDIEAVLQKSTIHHDPY
EMSDMKKAIDRINTAIDNQERILVYGDYDADGVTSTSILVSTLQELGAEVGWYIPNRFTE
GYGPNEAAFKNAYDEGVNLIITVDNGIQGHKEIKAAQELGMDVILTDHHEIGETLPEAFA
IVHPMHPEFDYPFKYLSGAGVALKIAQALLDHPSSYYTVLAAIGTVADLVSLTDENRAIV
QSGLDILNQTEFPSIQALLNNAGYKDTITEETIGFVIGPRLNAVGRLDDASLAAELLMSE
NPEDAEFLAEQVEHFNQERKDIVKEISDEALLMAAKQVEKGNQFLVLAQENWHEGVLGIA
ASKVVETYGLPTIILNIDTAQNFAKGSARSIEQVSMYDILDKERELISKFGGHHMAAGMT
LPIENIEQLSEALNRHMFEISRTEDISPHKTVDLVLDENDITVKNIRDIQKLRPFGTDFT
SPLFQLNDIKILQAKGIGQEGKHLKMTLGNSKLQSLYWQHGDYASQIEPNQPINMIGTLQ
INEWNGNQSPQFMVQDMASETLQILDFRGKARQQLKPHDNIPVAEIVNKKTEKEHEHQYF
YGDIIENEYERYIFKELPLTITAMENTLASIPQSQIILELNHRNSIYFDGMPDLNKFKKC
YKALLSKNNVNLKQDGMQLCEYLNVKPNVLIFMLKVFNELDFIEDNNGIITVNKDVEKKE
ITSSRLYQARMNRIDVEKFLLYDDFSKVKLWIKDQLAK
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagcaaaattcaaatgggatttaaaacagaattcaaaagaaatttctgaacaa
gtcgtctcagaaatgaaaataacatcaattgtacagaagattttagaaagcaaaaatata
attgaaaaagaagatattgaagcggtactgcaaaaatctacaatccatcatgatccttat
gaaatgagtgatatgaaaaaagctatagatcggattaacacagctattgataatcaagaa
cgtatattagtatatggagattatgatgctgatggcgtgacctcaacttcaattttagtt
tcaactcttcaagagttaggtgctgaagtcggttggtatattcctaatcgatttacagaa
ggatacggccctaatgaagccgcatttaaaaatgcatatgatgaaggcgttaatttaatt
attaccgtagataacggaatacaaggtcataaagaaattaaagcggcccaagaattaggc
atggatgtcattctgacagatcatcatgaaattggtgaaacactaccagaagcttttgca
atcgtccacccgatgcatcctgaatttgattatccttttaaatatttaagcggagcgggt
gtagcattaaaaatagcgcaagcattattggatcatccttcatcctactatacggtttta
gcagctatcggaacagtcgctgatttagtttctttaacagatgagaaccgtgctattgta
caaagcggattagatatattaaatcagacagaatttccttctattcaagcattgcttaat
aatgctggatataaagacactatcactgaagaaacaataggatttgtgattggtccacga
ttaaatgcagttggaagattggatgatgcaagtttagccgctgaattgttgatgtctgag
aatccagaagatgcagaatttctagctgagcaagttgaacattttaatcaagaacgtaaa
gatattgtgaaagaaatttcagacgaagctttattaatggcagcaaaacaagttgagaaa
ggtaatcaattcttagtattagcacaagaaaattggcacgaaggtgtcttgggtattgca
gcttctaaagtggtagaaacttatggcctgcctacaattatattaaacattgataccgct
caaaattttgctaaaggttcagcaagaagtatcgaacaagtctctatgtatgatatttta
gataaagagcgtgagcttattagcaaattcgggggtcatcacatggcggccggtatgacg
ttgcctatcgaaaatattgagcagttaagtgaggctttaaatcgtcatatgtttgaaata
tcacgtactgaagatatttctccgcataagactgtggatttagtattagatgaaaatgat
attacagtaaaaaatattcgcgacattcaaaagttgagaccctttggtacagatttcaca
agtccgcttttccagcttaacgatattaaaatcttgcaagcgaaaggaatcggccaagaa
ggcaagcatttaaaaatgacgcttggtaattccaaactacagagtctatattggcagcac
ggcgattatgcaagccaaattgaacctaatcaacctattaatatgattggaacattgcaa
attaatgaatggaatggtaatcaatctcctcagtttatggttcaagatatggcatctgaa
acgttgcaaatattagatttcagagggaaagccagacagcagttaaagccccatgacaat
attcctgttgctgaaattgtgaataaaaagactgaaaaagagcatgaacatcaatatttt
tatggtgatattattgaaaatgaatatgaacgctatatttttaaagagttacctttaacc
attacagcgatggaaaatacattggcttctataccgcaaagtcagattatactagaactc
aaccatcgaaattccatttattttgatggcatgccggatttaaataaattcaagaagtgc
tataaagcgctgctttctaaaaataatgtgaatttaaaacaagatggaatgcaactatgc
gaatacttgaatgtaaagccaaatgtgcttatttttatgcttaaagtctttaatgaattg
gatttcattgaggataataatggtataataacagtgaacaaggatgtagaaaagaaagaa
attacttctagtcggctctatcaagcaagaatgaatcgaatagacgtagagaagtttttg
ctttatgatgatttttcaaaagtgaaattatggataaaagatcagctagcaaagtga
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