Staphylococcus debuckii: CNQ82_09820
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Entry
CNQ82_09820 CDS
T07127
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sdb
Staphylococcus debuckii
Pathway
sdb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNQ82_09820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdb03019
]
CNQ82_09820
03009 Ribosome biogenesis [BR:
sdb03009
]
CNQ82_09820
Enzymes [BR:
sdb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNQ82_09820
Messenger RNA biogenesis [BR:
sdb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CNQ82_09820
Ribosome biogenesis [BR:
sdb03009
]
Prokaryotic type
rRNA helicases
CNQ82_09820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Flavi_DEAD
Cas3-like_C_2
INTS5_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AYU55704
LinkDB
All DBs
Position
complement(2045581..2047092)
Genome browser
AA seq
503 aa
AA seq
DB search
MQKFKDLGVSDKTAETLGNMGFAEPTPIQNDSIPFALNGLDILGQAQTGTGKTGAFGIPL
IEKVVDKEGVQALILAPTRELAMQVAEQLRAFSRGQRVQVATVFGGMPIGRQIKALKKGP
QIVVGTPGRVIDHLNRRTLKTNDIKTLIIDEADEMMNMGFIDDMRFIMDHLPSEQRQTML
FSATMPKAIQTLVQQFMKSPKIVKTMNNEMSDPQIDEYYTIVKELEKFETFTNFLDVHQP
ELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKKGIAVTFVNPIEMDYIRQIEQTND
RRMRALRPPHRKEVLRARENDIKEKVEKWMSQEHSERLQNISSQLLNEYNDVELVSALLQ
ELVEANDEVEVQLTFEKPLARKGGRHNSKGPRRGGKPNKRSNNKFDNKNRRSKGNKGGKH
NNNKKFKNDKKPIKGRTFADMQK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaatttaaagatttaggtgtttcagataaaacagctgaaacgcttggtaatatg
ggtttcgcagaaccgactccaatccaaaatgacagtattccttttgcattaaacggatta
gatattttggggcaagcacaaactggtactggtaaaactggagcatttggtatcccatta
atagaaaaagtagtagataaagaaggcgttcaagccttaatcttagcaccaactcgtgaa
ctagcaatgcaagttgctgaacaattgagagcatttagtcgcggtcaacgcgttcaagtg
gcaacagtattcgggggaatgccgattggacgtcaaatcaaagccttgaaaaaaggtcct
caaatcgtagtgggcactccaggacgtgtaatcgaccacttaaatcgtcgtacattgaaa
accaatgatattaaaacattgattattgatgaagcggacgaaatgatgaatatgggattc
atcgatgatatgagattcatcatggatcatcttccatcagaacaacgtcaaacaatgttg
ttctcagctacaatgcctaaagctatccaaactttagtacaacaatttatgaaatcacct
aaaattgtaaaaacaatgaataacgaaatgtcagatcctcaaattgatgagtattataca
attgtgaaagaacttgaaaaatttgagacatttactaatttcttagatgtacatcaacct
gaattggcgattgtcttcggtcgtacaaaacgccgtgtagatgagttgacaagtgcactc
atttctaaaggttataaagcagagggcttgcatggtgatatcacacaagcgaaacgttta
gaagtattgaagaaatttaaaaatgatcaaatcgatattttagttgctactgatgtggca
gcacgtggactagatatttcaggtgtcagtcatgtttataactttgatattcctcaagat
actgaaagttatactcaccgtatcggacgtacaggccgtgcgggcaaaaaaggtatcgca
gtcactttcgttaatccgattgaaatggattatatccgtcaaatcgaacaaacaaatgac
cgccgtatgagagcattgcgtcctccgcatcgcaaagaagttttaagagcacgtgaaaat
gatattaaagaaaaagttgaaaaatggatgtctcaagaacattcagaacgcttacaaaat
atctcatctcaattattgaatgaatataatgatgtagaacttgtatctgctttattacaa
gaattagtagaagcaaatgatgaagtagaagttcaattaacatttgaaaaaccacttgct
cgtaaaggtggtcgtcataattctaaaggtccacgcagaggtggtaaaccaaataaacgt
tcaaataataaatttgacaataaaaaccgtcgcagtaaaggaaataaaggcggtaaacac
aacaataataagaaatttaaaaatgataaaaaaccgattaaaggtcgtacgtttgcagat
atgcagaaataa
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