Streptococcus dysgalactiae subsp. equisimilis AC-2713: SDSE_0790
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Entry
SDSE_0790 CDS
T02333
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sdc
Streptococcus dysgalactiae subsp. equisimilis AC-2713
Pathway
sdc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sdc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SDSE_0790 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdc03021
]
SDSE_0790 (rpoD)
Transcription machinery [BR:
sdc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SDSE_0790 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
WHD_DprA
DUF2316
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
CCI62287
UniProt:
A0AB33R5N4
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All DBs
Position
734685..735794
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AA seq
369 aa
AA seq
DB search
MTKEKEISTFNVQVAEFIRHHKKEGTAIDDDVTEKLVIPFALDADQIDDLLERLTDGGIS
ITDKEGNPSSKYIVEEPKPEELTDEELIGSNSAKVNDPVRMYLKEIGVVPLLTSEEEKVL
AVAVAEGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMEMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQL
DEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRS
KQLRDFIED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaaaaagaaatttcaacttttaatgttcaagttgcggagtttattcgtcat
cataaaaaagaaggaacagctattgatgatgatgtaaccgaaaagcttgtcattccattt
gccttggatgctgatcaaattgatgacctccttgagcgtttgacggatggtgggatttct
attaccgataaagaaggcaacccatcgtctaaatatattgtggaagaaccaaaaccagaa
gagttaaccgatgaagaattaattggtagcaactctgctaaagtgaatgaccctgtccgc
atgtacctcaaagaaattggtgtggtaccacttttaacaagtgaagaagaaaaagtgttg
gcagtagcagttgcagaaggtgacctagaagctaaacaacgtctagcagaagctaaccta
cgtttggtagtttctattgccaagcgttatgttgggcgtgggatgcaattcttggacttg
attcaagaaggaaatatggggttaatgaaagctgttgataagtttgactattcaaaaggc
tttaaattctcaacctatgcgacttggtggattcgtcaggctattactcgtgctattgca
gaccaagctcgtacgattcgtattccagttcacatggtggaaaccattaacaaattggtt
cgtgaacaacgtaatctgttgcaagagttagggcaagacccgacaccagaacaaattgca
gagcgcatggaaatgactccagacaaggttcgtgaaattctaaaaattgctcaagaacct
gtttctttagaaacaccaattggggaagaagatgatagtcacttaggtgattttatcgaa
gacgaagtcattgaaaatcctgttgattatactactcgcgtggttctacgtgaacagtta
gatgaggttttggataccttgacagatcgtgaagaaaatgttcttcgcctacgctttgga
cttgacgatggtaaaatgcgcacccttgaagatgtgggtaaagtctttaacgttacccgt
gagcgtatccgtcaaattgaagctaaagcgcttcgcaaactccgccatccaagccgtagc
aagcaattaagagactttatagaggactaa
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