Streptococcus dysgalactiae subsp. equisimilis AC-2713: SDSE_1250
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Entry
SDSE_1250 CDS
T02333
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sdc
Streptococcus dysgalactiae subsp. equisimilis AC-2713
Pathway
sdc00521
Streptomycin biosynthesis
sdc00523
Polyketide sugar unit biosynthesis
sdc00525
Acarbose and validamycin biosynthesis
sdc00541
O-Antigen nucleotide sugar biosynthesis
sdc01100
Metabolic pathways
sdc01110
Biosynthesis of secondary metabolites
sdc01250
Biosynthesis of nucleotide sugars
Module
sdc_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SDSE_1250 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SDSE_1250 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
SDSE_1250 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SDSE_1250 (rmlB)
00525 Acarbose and validamycin biosynthesis
SDSE_1250 (rmlB)
Enzymes [BR:
sdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SDSE_1250 (rmlB)
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Gene cluster
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
adh_short
NmrA
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
CCI62744
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Position
complement(1177790..1178833)
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AA seq
347 aa
AA seq
DB search
MYKNIIVTGGAGFIGSNFVHYVYNNHPEVHVTVLDKLTYAGNRANIEEILGDRVELVVGD
IADAELVNELAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARHYNIRFHH
VSTDEVYGDLPLREDLPGQGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSFGVK
ATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDHSTGVWAILT
KGRIGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDSTKLREEL
GWEPQFTNFSEGLKDTIKWYTDHQDWWKADKEAVEANYAKTQTVIQK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaatattatcgtaaccggtggggcaggtttcatcggttctaactttgtacac
tatgtctacaacaaccatccagaggtgcatgtgacggtccttgacaaattaacatacgct
gggaatagagctaatattgaagaaattttaggggatcgcgttgagttagtagttggagat
attgccgatgcagaattggttaatgaattagccgcaaaagcggatgcgattgtgcattac
gcggctgaaagccacaatgacaattctctcaacgatccaagtccctttattcacacgaat
tttattggcacttataccttgttagaggctgcacgtcactataatattcgtttccaccat
gtatcaacagatgaagtttatggagatcttcctttgcgcgaagacctcccaggacagggt
gaaggaccaggtgaaaaattcactgctgaaacaaaatacaatccatcatcaccttactca
tcaactaaggcagcttctgaccttatcgttaaggcatgggtacgttctttcggtgtgaaa
gcaactatttcaaattgttccaataactacggaccttaccagcacattgagaaatttatt
cctcgccaaatcaccaatattttatcaggcatcaagccaaaactatacggtgaagggaaa
aatgtccgtgactggattcatactaatgatcattctacaggagtatgggctattttgact
aagggtcgtatcggtgaaacataccttattggtgccgacggcgagaaaaacaacaaggaa
gttcttgagcttatccttgagaaaatgggtcaaccaaaagatgcttatgatcacgtaact
gaccgtgctggtcacgatcttcgttacgctattgattctacaaaattgcgtgaagaactc
ggctgggaaccacaatttacaaacttttcagaaggtttgaaagatactatcaaatggtat
acagatcaccaagattggtggaaagctgataaggaagctgttgaggccaattatgccaag
actcaaacagttatccaaaaataa
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