Streptococcus dysgalactiae subsp. equisimilis AC-2713: SDSE_1562
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Entry
SDSE_1562 CDS
T02333
Symbol
rheA
Name
(GenBank) K05592 ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sdc
Streptococcus dysgalactiae subsp. equisimilis AC-2713
Pathway
sdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SDSE_1562 (rheA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdc03019
]
SDSE_1562 (rheA)
03009 Ribosome biogenesis [BR:
sdc03009
]
SDSE_1562 (rheA)
Enzymes [BR:
sdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SDSE_1562 (rheA)
Messenger RNA biogenesis [BR:
sdc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SDSE_1562 (rheA)
Ribosome biogenesis [BR:
sdc03009
]
Prokaryotic type
rRNA helicases
SDSE_1562 (rheA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
DUF1924
Motif
Other DBs
NCBI-ProteinID:
CCI63056
UniProt:
A0AB33R751
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All DBs
Position
complement(1478050..1479669)
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AA seq
539 aa
AA seq
DB search
MKFTEFNLSEDIQSAVVTAGFEKASPIQEMTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIRTNENIIQALVIAPTRELAVQSQEELFRFGREKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALILDHVETLILDEADEMLNMGFLEDIEAIISRVPADRQTLLF
SATMPAPIKQIGVKFMKDPEHVQIKNKELTNVNVDQYYVRVKEQEKFDTMTRLMDVNQPE
LSIVFGRTKRRVDEITRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDILVATDVAA
RGLDISGVTHVYNYDITQDPESYVHRIGRTGRAGKSGESITFVSPNEMGYLSMIENLTKK
QMKPLRPATAEEAFQAKKKVALKKIERDFADDAIRSNFDKFKGDAIQLAAEFTPEELALY
ILSLTVQDPDSLPEVEIAREKPLPFKYVGGGHGNKNGKGGRGRDNRNRGDRRGGYRGDRN
RDERDGDRRRQKRDKRDGHDGSGNRDFKRKSKRNSKDFFNKEKKSSAKNTGFVIRHKGE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaatttaacttatcagaagacatccaatcagctgtcgttaccgctggt
tttgagaaagcatctcctatccaggaaatgacgattcctctcgcactagaagggaaggat
gttattggtcaggcacaaacaggaactggtaaaacagcagcgtttggtctaccaaccttg
aataagattcgtactaacgaaaatatcatccaagcattggtcattgcaccaacgcgtgaa
ttggctgtacaaagtcaggaagaattgttccgttttggacgtgaaaaaggggttaaggtt
cgctctgtttacggtggatcaagtattgaaaaacaaatcaaagcccttaaatcaggtgcc
cacattgtcgtgggaacaccaggccgcttgttagatttgattaagcgcaaggctcttatt
ttagatcatgtggaaaccttaatccttgatgaagcagatgagatgcttaacatgggattc
ttggaagacattgaagctattattagtcgtgtcccagcagaccgtcaaaccttgctcttc
tccgcaacgatgccagcacctattaaacaaatcggggtaaaattcatgaaagaccctgag
catgttcaaattaagaacaaagaattaaccaacgtgaatgttgatcaatactatgtccgt
gtgaaggaacaagaaaaatttgataccatgacacgtttgatggatgttaaccaacctgaa
ttatctattgtttttggtcggactaaacgtcgtgttgatgagattacacgtggtctaaaa
ttacgtggtttccgtgccgaaggaatccatggtgatctagaccaaaataaacgcttacgc
gttatccgtgatttcaaaaacgatcaaattgatattcttgtagccactgatgtggcagca
cgtggtcttgatatttcaggagttacccacgtttataactacgatattacccaagatcca
gaaagttatgttcaccgtattggccgtactggtcgtgcgggtaaatcaggtgagtcaatc
acttttgtctcaccaaatgagatgggctacctctcaatgattgagaacttaacgaaaaaa
cagatgaaacctctccgcccagcaactgcagaagaggctttccaagccaagaaaaaagta
gcccttaaaaaaattgaacgtgattttgcggatgatgctattcgttctaactttgacaaa
ttcaaaggagatgctatccaattagcagctgaattcactccagaagagttggcattgtat
attttgagcttaacggttcaagatccagatagcttaccggaagttgaaattgcacgtgaa
aaaccattaccattcaaatatgtgggtggtggtcacggcaataaaaatggcaaaggtggt
cgtggacgtgacaaccgtaaccgtggtgatcgccgtggcggctatcgtggtgaccgtaac
agagatgagcgtgatggtgaccgtcgtcgtcaaaaacgtgataagcgtgatggtcacgat
ggcagtggcaaccgcgatttcaaacgtaaatcaaaacgtaatagtaaagactttttcaat
aaagagaaaaaatcaagtgctaaaaatactggttttgtgattcgtcacaaaggtgaataa
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