Streptococcus dysgalactiae subsp. equisimilis AC-2713: SDSE_1979
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Entry
SDSE_1979 CDS
T02333
Symbol
recD
Name
(GenBank) K03581 exodeoxyribonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sdc
Streptococcus dysgalactiae subsp. equisimilis AC-2713
Pathway
sdc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SDSE_1979 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdc03400
]
SDSE_1979 (recD)
Enzymes [BR:
sdc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SDSE_1979 (recD)
DNA repair and recombination proteins [BR:
sdc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SDSE_1979 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
DEAD
AAA_22
AAA_12
nSTAND3
AAA
TsaE
AAA_16
DUF815
NPHP3_N
HHH_5
AAA_28
UvrD_C
AAA_7
Zeta_toxin
NACHT
AAA_14
Rad17
5_3_exonuc
SLFN-g3_helicase
Helicase_RecD
RsgA_GTPase
AAA_5
AAA_29
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
CCI63460
UniProt:
A0AB33R7H2
LinkDB
All DBs
Position
1886709..1889162
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AA seq
817 aa
AA seq
DB search
MEHFFTGTVDRIIFENAANFFKILLLAIEDTDSDIDDFEIIITGTMADIIEGDDYTFWGE
LTQHPKYGQQLKLSRYQKVKPSSSGLVNYFSSDHFKGIGKKTAEKIIALYGNNTIDHILE
DPSKLETISGLSKANRQAFVAKLKLNYGTEQLIAGLVELGLSNRFAFQAFEKYKEEALDL
VKENPYQLVEDLQGFGFKMADALAENLGIESDSPKRFRAALLHCLLEESINRGDTYVQAR
QLLDFAITLLEDARQVECDPAAVAEQLSELIIEGKIKNSDTKLFDASLYFAEEGIAKNIS
RLLDTPLSQSFSHDTIQTTIQAVQEDFAITYDQVQQEAIAKALTSKVFLLTGGPGTGKTT
VIRGILQAYANLHQIDLDKKDLPILLAAPTGRAARRMNELTGLPSATIHRHLGLNGDNDY
QAMEDYLDCDLLIVDEFSMVDTWLANQLLAAISSTTQVIIVGDSDQLPSVGPGQVLSDLL
KVNSLPQIALQKIFRQSQESTIVDLADQMRRGILAADFRDKKADRSYFEAQASFIPDMIQ
KIVLSAIKSGIPAEEIQILAPMYKGQAGINHLNQLMQNLLNPLEGQTEFLFNDTHFRKGD
KVLHLVNDAQLNVFNGDIGYITDLIPAKYTESKQDELILDFDGSEVTYPRNEWLKLTLAY
AMSIHKSQGSEFQVVILPITRQSGRLLQRNLIYTAITRSKSKLIMLGEFAAFDYAIKNEG
DKRQTYLVERFQEQSDLASSQPNQELKSKEQTSLFSNTAALEDDSQKSSSQSTNSNPTEN
SQSDNDDFRLTPENYSTIDSMIGLTESDIALFFQKKF
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggaacacttttttactggtactgttgaccgcattatctttgaaaatgcagctaatttt
tttaaaattctcctccttgccatcgaagacacagatagtgatattgacgactttgaaatc
attatcacagggacgatggctgacattattgaaggagatgactacaccttttggggggaa
ttgacccagcaccctaaatatggacagcaactcaaactaagccgttaccaaaaagtcaaa
cctagttcatctggtttggttaattatttctccagcgaccattttaaggggattggaaag
aaaacagcggagaaaatcattgccctctatggcaataatactattgaccatattttagaa
gacccaagtaaattagaaactatttctggtctgtccaaagctaatcgtcaagcctttgtc
gctaaactgaaattgaattatggcacagagcaactgattgctggtctcgtcgaacttggc
cttagcaaccgttttgcctttcaagcgtttgagaagtacaaagaagaggctcttgacctt
gttaaagaaaatccctatcaattagtcgaagatctacaaggttttgggtttaaaatggca
gatgctctcgctgaaaacttagggattgaaagcgactctccgaaacgttttcgtgcagcc
ctccttcactgtctcttggaagaatccatcaatcgaggagatacttatgtccaagcacga
caattattagactttgccatcacactccttgaagatgcacgtcaagtagaatgtgaccct
gctgctgtggctgaacaactaagcgagttaatcatagagggcaaaatcaaaaacagtgac
accaaattgtttgatgctagcctttattttgctgaagaggggattgctaagaatatctct
cgtctcttagatacccctttaagtcagtcatttagtcatgataccatccaaacaaccatc
caagccgttcaagaagactttgctatcacttatgaccaggtgcagcaagaagccattgct
aaagccttaaccagcaaggtatttctcctaacaggtggtcccggaacagggaaaacaact
gttattcgaggcattttacaggcttacgctaacctgcatcagattgatttggataaaaaa
gaccttcctatcttgttagcagctccaacaggtcgggctgcacgtcgcatgaatgagttg
actggacttcctagcgcaaccatccacaggcacttaggcctcaacggcgacaacgattac
caagccatggaagattatctagactgcgacttgctgattgtcgatgaattttcaatggtg
gatacctggcttgccaaccaattgttagcagcgattagttcaacaactcaagtaattatt
gtcggagatagtgaccagcttccttcggttggacccggtcaagtcctgtcagatctttta
aaagtcaatagcctgccccaaatcgccttgcaaaagatatttcgtcaatcccaagaatct
actattgtagatttggcagaccagatgcgtcgaggaatcttagctgctgactttcgtgac
aaaaaagctgaccgttcttattttgaagcccaagcctctttcatcccggacatgattcaa
aaaattgttctatctgctattaaaagtggcatccctgctgaggaaattcaaattttagcg
cctatgtacaaaggacaggctggcatcaatcatcttaaccaattgatgcaaaacctcctc
aaccctttggaagggcaaacggaatttctgttcaatgatacgcattttcgtaaaggtgat
aaagtcttgcacttagtcaacgatgctcagttgaatgtctttaacggagatattggttat
attacagatttgattcctgctaaatataccgaatctaagcaagacgaattaatcttagat
tttgacggtagcgaagtaacgtatcctagaaatgaatggctaaaattaaccttagcctat
gccatgagcattcataagtcacaagggagcgagtttcaagtggtgattttacccatcaca
cgccaaagcggccgacttttgcaacgaaatttaatttatactgctatcacccgttctaaa
agtaagttgattatgctaggtgaatttgcagcctttgactatgctattaaaaatgaaggg
gataaacggcaaacttatttggtggaacgcttccaagaacaatccgacttagcctcctct
caacctaaccaagagctaaaatcaaaagagcagacctcccttttttctaatacggcagcc
cttgaggacgactctcaaaaatcttcctctcaatcaacaaactctaaccccactgagaac
tctcagtcagataatgatgattttaggttaacacctgagaattattcgactatcgattcg
atgatagggcttacagaatcagatattgccctctttttccagaaaaaattctag
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