Streptomyces dangxiongensis: D9753_04550
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Entry
D9753_04550 CDS
T08044
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sdd
Streptomyces dangxiongensis
Pathway
sdd00040
Pentose and glucuronate interconversions
sdd01100
Metabolic pathways
sdd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sdd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
D9753_04550
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D9753_04550
Enzymes [BR:
sdd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
D9753_04550
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
AYN38314
UniProt:
A0A3G2J850
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Position
1016363..1017907
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AA seq
514 aa
AA seq
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MRRSAAVRLYAAGAAVALAAATGAVMSTTFASAVTGGATGYAGQNGGTTGGAGGATVRAT
TGTAIHAALCNRASRDTPLTIEVEGTINHANTTKVSGPGCDTADGVIELKRIRNVTLVGV
GSGAVFDQVGIHVRESGNIIIQNVTVRNVKKSGSPTSNGGDAIGMESGVRNVWVDHTTLE
ASGGESEGYDSLFDLKDNTQYVTLSYSVMRDSGRGGLVGSSDTQLSNGYVTYHHNLYENI
DSRTPLLRGGIAHIYDNYYRNLNKSGINSRAGARAKVDNNYFEDSKDVLGTFYTDAAGYW
QVGGNIFDNVTWSAPGAENHPAGPGPTSNTTVDVPYSYRLDDAACVPSIVTRTAGAGTGL
KVSDGNCSAQTPAPTPSTPTPAPTPTTGPTQPGGTNLSLGAGADGSGKADGTSYGNVRDG
DMSTYWSPAGPTGSVSVKWGTATTVSRIDIREASGATGAVGSWRVLDGDTGTTLASGSGA
GAIAVPRTTLKKITFEITGSSGTPRIAEFETYAG
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgagacgttcagccgcagtgcggctctacgcggccggagccgccgtagcgctcgcagcc
gcgaccggagctgtcatgtccacaacattcgcatcggcggtgaccggcggcgcgaccggc
tacgccggccagaacggcggcaccaccggcggggcgggcggtgcgaccgtgcgggccacc
acgggcaccgccatccacgcggccctgtgcaaccgggcgagccgcgacacacccctcacc
atcgaggtagaggggacgatcaaccacgccaacaccaccaaggtgtcgggccccggctgc
gacaccgccgacggtgtgatcgagctgaagcggatccgcaacgtgacgctggtcggagtc
ggcagcggggcggtcttcgaccaggtgggcatccatgtccgcgagtccggcaacatcatc
atccagaacgtgacggtgaggaacgtcaagaagtcgggttcgcccacgtccaacgggggc
gacgccatcggcatggagagcggcgtccgcaacgtctgggtcgaccacaccacgctggaa
gcgtccgggggcgagtccgaggggtacgacagcctgttcgacctgaaggacaacacgcag
tacgtgacgctgtcctacagcgtcatgcgcgactcgggccgaggcggtctcgtcgggtcg
agcgacacacagctctccaacggctacgtcacctaccaccacaacctgtacgagaacatc
gactcccgcaccccgctgctgcgcggcggcatcgcccacatctacgacaactactaccgg
aacctgaacaagtccggcatcaactcccgtgcgggcgcccgcgccaaggtcgacaacaac
tacttcgaggactcgaaggacgtcctgggcaccttctacacggacgcggccgggtactgg
caggtcggcggcaacatcttcgacaacgtgacctggtcggcgccgggcgcggagaaccac
ccggccggtccgggcccgacgtcgaacaccaccgtcgacgtgccgtactcctatcgcctc
gacgacgcggcgtgcgtgccgtccatcgtgacgcggacggccggtgccggcaccggactg
aaggtgtcggacggcaactgctcggcccagacgcccgccccgacgccgagcacgccgaca
ccggcacccaccccgaccaccgggccgacgcagcccggcggcaccaacctcagcctgggc
gccggtgccgacggctccggcaaggcggacgggacgagctacggcaacgtccgcgacggc
gacatgagcacctactggtcgcccgccggtccgacggggtccgtctcggtcaagtggggc
acggcgaccacggtgtcccggatcgacatcagggaggcgtccggcgccacgggcgccgtc
ggctcctggcgggtcctcgacggggacacgggcacgaccctggcctccggcagcggggca
ggggccatcgccgtcccccggaccaccctcaagaagatcactttcgagatcaccggttcc
agcggcaccccgaggatcgccgagttcgagacctacgccgggtga
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