Streptomyces dangxiongensis: D9753_08980
Help
Entry
D9753_08980 CDS
T08044
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sdd
Streptomyces dangxiongensis
Pathway
sdd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D9753_08980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdd03019
]
D9753_08980
03400 DNA repair and recombination proteins [BR:
sdd03400
]
D9753_08980
Enzymes [BR:
sdd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D9753_08980
Messenger RNA biogenesis [BR:
sdd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D9753_08980
DNA repair and recombination proteins [BR:
sdd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D9753_08980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AYN39025
UniProt:
A0A3G2JCA5
LinkDB
All DBs
Position
2032910..2035075
Genome browser
AA seq
721 aa
AA seq
DB search
MEHTSNADLRAEADAVLARLVGNASGAARLREDQWRAIEALVADKRRALVVQRTGWGKSA
VYFVATSLLRARGSGPTVIVSPLLALMRNQVEAAARAGIHARTINSANTEEWEDVQAEIA
AGGVDVLLVSPERLNNPDFRDQVLPKLSAATGLLVVDEAHCISDWGHDFRPDYRRLRTML
GDLPPGVPVLATTATANARVTADVAEQLGTGGASDALVLRGPLDRESLRLAVLPLPDAAH
RMAWLADHLDELPGSGIIYTLTVAAAEEVTAFLRQRGHTVASYTGKTENADRQQAEDDLL
ANRVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVENAEVLLLPGKE
DEAIWEYFASLAFPSEELVRRTLDVLGRAGGPLSLPALEPLVELRRSRLETMLKVLDVDG
AVHRVKGGWIATGQPWSYDSERYAWVARQRAAEQQAMREYAATTECRMEFLQRQLDDEGA
KPCGRCDNCAGPRFTAGLSTTALDAARSDLGRAGVEVEPRRMWPTGLPAIGINLKGRIPA
GEQASPGRALGRLSDIGWGNRLRPLFAPQTPDADVPDDVARAVVDVLADWARGPGGWASG
APDALPRPVGVVTVASRSRPRLVHSLGVRIAEIGRLPLLGAVEYDGGVTRMPRSNSAQRL
KVLDGALTVPPTLVSALAEAHGPVLLIDDFTETGWTMAVAARLLRKSGAQGVLPLVLAVQ
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggagcacacgagcaacgcggatctccgggcagaggcggacgccgtcctcgcccggctc
gtcgggaatgcctcgggcgccgcccggctgcgcgaggaccagtggcgggcgatcgaggcg
ctggtcgccgacaagcgccgggccctggtcgtgcagcgcacgggatggggcaagtccgcg
gtgtacttcgtggccacctcactgctgcgggccagaggaagcgggcccacggtgatcgtc
tcgcccctgctcgcgctcatgcgcaaccaggtggaggccgcggcccgggccggcatccac
gcccggaccatcaactccgccaacaccgaggagtgggaggacgtccaggccgagatcgcg
gccggtggcgtcgatgtgttgctcgtctcgccggagcggttgaacaacccggacttccgt
gaccaggtcctgcccaagctgtccgcggccaccggcctgctggtcgtggacgaggcccac
tgcatctccgactggggtcacgacttccgccccgactaccgccgcctgcgcaccatgctc
ggcgacctcccgcccggcgtccccgtgctggccaccacggccacggccaacgcgcgggtg
accgcggacgtcgccgagcagctcggcacgggcggtgcgtcggacgcgctggtgctgcgc
ggccccctcgatcgggagagcctgcgcctggccgtgctgccgctcccggacgccgcgcac
cggatggcctggctcgccgaccatctcgacgagctgccgggctccggcatcatctacacg
ctcaccgtcgccgcggccgaggaggtcaccgccttcctgcgacagcgcgggcacactgtc
gcctcctacacgggcaagacggagaacgccgaccggcagcaggccgaggacgacctgctg
gccaaccgcgtcaaggccctggtcgccacgtctgcgctcggcatgggcttcgacaagccc
gatctcggtttcgtcgtccatctcggctcgccctcctcccccatcgcctactaccagcag
gtcggccgagccggccgcggtgtggagaacgcggaggtcctgctgctcccgggcaaggag
gatgaggcgatctgggagtacttcgcctcgctggccttcccctccgaggaactggtccgg
cgcaccctggacgtcctcggccgggccgggggacccctgtcgctgcccgccctggaaccc
ctggtcgagctgcgccgctcacgcctggagaccatgctcaaagtgctcgacgtggacggg
gcggtgcaccgggtcaagggcggctggatcgccaccggacagccatggtcgtacgactcc
gagcgctacgcgtgggtggcccggcagcgcgcggccgagcagcaggcgatgcgtgagtac
gcggccaccaccgagtgccggatggagttccttcagcgccagttggacgacgagggcgcc
aaaccctgtggccgctgcgacaactgcgcgggaccgcgcttcaccgccggcctgtccacg
acggccctggacgccgcacggagcgacctgggccgtgccggagtggaggtggagccccgc
cggatgtggccgaccgggctcccggccatcggcatcaacctcaaggggcgcatcccggcc
ggtgagcaggcctcgccggggcgggccctgggacgtctgtcggacatcggctggggcaac
cggctgcgtccgctgttcgcgccccagaccccggacgccgatgtcccggacgacgtggcg
cgagccgtggtcgacgtgctggccgactgggccagagggcccggcggctgggcctccggt
gcgcccgatgccctgccccggccggtgggcgtggtcaccgtcgcctcgcgcagccggccg
cggctggtccactcgctgggcgtacggatcgcggagatcggccggctccccctgctcggc
gcggtggagtacgacgggggcgtgacccggatgccgcgcagcaacagtgcccagcgattg
aaggtgctcgacggggcgttgacggtgccgcccaccctcgtgtcggcactcgccgaggct
cacggcccggtgctgctgatcgacgacttcacggagacgggctggaccatggcggtcgcg
gcgcgcctgctcaggaagtccggtgcgcagggggtgctgccgctcgtcctcgccgtccag
ggctga
DBGET
integrated database retrieval system
