Streptomyces dangxiongensis: D9753_12725
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Entry
D9753_12725 CDS
T08044
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sdd
Streptomyces dangxiongensis
Pathway
sdd00300
Lysine biosynthesis
sdd00470
D-Amino acid metabolism
sdd01100
Metabolic pathways
sdd01110
Biosynthesis of secondary metabolites
sdd01120
Microbial metabolism in diverse environments
sdd01230
Biosynthesis of amino acids
Module
sdd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sdd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D9753_12725 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D9753_12725 (dapF)
Enzymes [BR:
sdd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
D9753_12725 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF4442
Invasin_D3
Motif
Other DBs
NCBI-ProteinID:
AYN39643
UniProt:
A0A3G2JBD6
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All DBs
Position
2902548..2903348
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AA seq
266 aa
AA seq
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MRFRKIHGAGNDFILFTDPGPRAGTDWAKEAERLCARRTGVGADGLVVSRFVSPTSTVLD
VDCFNADGSTATMCGNALRCAAWAAQCDQGFRTMQLRMAGVMHEATVDADSVWVTADVGA
IQPRVLQTVINGRPTWFDSAHTGTEHVVAVVENVDAIHTEVVGRVVRHHKNVAPLGTNVN
FVQHLGGQALKIRTYERGVEAETLSCGSGAVAAVVIATMRGLVARREVTVHNEAGEPLTV
RPHDDHPNRAAWVGGPVTQTFEGVLA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttcgcaagatccacggagcgggcaacgacttcatcctcttcacggaccccggc
ccgcgagctggcacggactgggccaaggaggcggaacgcctctgcgccagacggaccgga
gtgggtgcggatggcctggtcgtcagccgcttcgtcagccccacctccacggtgctcgat
gtcgactgcttcaacgcggacggctcgaccgcaacgatgtgcggcaatgcgctgcgctgc
gcggcctgggcggcccagtgcgaccagggcttccgaaccatgcagctccgcatggccggc
gtcatgcacgaggccaccgtcgacgccgactctgtctgggtcacggctgacgtgggcgcc
atccagccccgagtcttacagacggtcatcaacggcaggccgacgtggttcgacagcgcg
cacaccggcacggaacacgtcgtcgccgtcgtggagaacgtggacgccatccacaccgaa
gtggtcggccgagtcgtccggcaccacaagaacgtggcgccgctgggtacgaacgtcaac
ttcgtccagcacctcggcggccaggcgctcaagatccgcacctacgaacggggcgtcgag
gccgagaccctctcctgcggcagcggagccgtcgccgccgtcgtcatcgccaccatgcgt
ggcctcgtcgccaggcgcgaggtcaccgtccacaacgaggccggtgagcctctcaccgtc
cgtccgcacgacgaccacccgaatcgggccgcctgggttggcgggccggtaacccaaacc
ttcgaaggggtactcgcatga
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