Streptomyces dangxiongensis: D9753_14420
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Entry
D9753_14420 CDS
T08044
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sdd
Streptomyces dangxiongensis
Pathway
sdd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sdd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D9753_14420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdd03021
]
D9753_14420
03400 DNA repair and recombination proteins [BR:
sdd03400
]
D9753_14420
Enzymes [BR:
sdd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D9753_14420
Transcription machinery [BR:
sdd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D9753_14420
DNA repair and recombination proteins [BR:
sdd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D9753_14420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
AYN39917
UniProt:
A0A3G2JK34
LinkDB
All DBs
Position
complement(3268356..3272255)
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDDERRTRDLPSLEAHVSVERQQIENRRDADLETRAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWTRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLDEEAEKLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGELRDTKGE
GRAFGSTAEAIMAFDAGELALQSQVDIRFPVGTIPPRGWTPPAREEGEPEWQQGDSFRLR
TTLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFFWAT
RSGVTVAISDVVVPEAKKEIVKGYEAQDEKVQKQYERGLITKEERTQELIAIWTKATNEV
AEAMNENFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLVIAERG
ADGVLRKAEDVETSVYARCLAEDIVVDGKVLAPAGTDLGDVLIDELVRHGVEEVKTRSVL
TCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEASGRVRIEETEKTKKLVVTPDDGSDETAFPISKRAKV
LVREGDHVEVGQQLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSRFEQENRRVVQEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgagctccggatcggtctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgttcgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtcacccgcgccaaggtgcgccgtgagcggatgggccacatcgaactggccgcgccc
gtcacgcacatctggtacttcaagggtgtcccgagccggctgggctacctgctcgacctg
gctcccaaggacctcgagaaggtcatctacttcgcggcgtacatgatcacgtacgtcgac
gacgagcgtcgtacccgcgacctgccctccctggaggcgcacgtctccgtcgagcgccag
cagatcgagaaccgccgggacgccgacctggagacccgcgccaagaagctcgagaccgac
ctggccgagctggaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgagggt
gccgagcgcgagatgaagcagctgcgcgaccgtgcgcagcgcgagatcgaccgcctcgac
gaggtgtggacccggttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggctcgatgggtgccgcggcg
ctccagaagcgcctggagtccttcgacctcgacgaggaggccgagaagctccgcgagatc
atccgcacgggcaagggccagaagaagacccgcgccctgaagcggctgaaggtcgtctcc
gcgttcctccagacgtccaacagccccaagggcatggtcctggactgcgtcccggtcatc
ccgccggacctgcgtccgatggtgcagctcgacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtcatcaaccgcaacaaccgcctgaagcggcttctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccgcccggtcacgggccccggcaaccgcccgctgaag
tccctcagcgacatgctgaagggcaagcagggccgtttccgtcagaacctgctcggcaag
cgagtcgactactcggcgcgttccgtcatcgtcgtcggcccgcagcttaagctgcaccag
tgcggtctgcccaaggcgatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gtggacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtggagcgcggccgt
acggtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gctcccaccctgcaccgcctcggcatccaggccttcgagccgcagttggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgaagccggccgacggccgcccggtgacgatgccgacccaggac
atggtcctcggtctgttcttcctcaccaccgacggcgagctgcgtgacaccaagggcgag
ggccgcgcgttcggttccacggccgaggcgatcatggcgttcgacgccggcgagctggcg
ctgcagtcgcaggtcgacatccgcttcccggtgggcaccatcccgccgcgcggctggacc
ccgccggcccgcgaggagggcgagcccgagtggcagcagggtgactcgttccggctgcgc
acgaccctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactcggtgggcaagaagcagctctccgagatcgtcaacgacctggccgagcgctacccc
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggcttcttctgggcgacc
cgttccggtgtcaccgtggccatctccgacgtcgtcgtccccgaggcgaagaaggagatc
gtcaagggttacgaggcgcaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggaagagcgcacgcaggagctcatcgcgatctggaccaaggcgaccaacgaggtc
gccgaggcgatgaacgagaacttccccaagaccaaccccatcttcatgatggtcgactcg
ggtgcccgaggaaacatgatgcagatgaggcagatcgcgggtatgcgcggtctggtgtcg
aacgcgaagaacgagaccatcccgcgtccgatcaaggcctcgttccgtgagggtctgtcc
gtgctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgccctg
cgtaccgccgactcgggttacctcacccgtcgtctggtcgacgtctcgcaggacgtcatc
atccgcgaggaggactgcggcaccgagcgcggtctcaagctcgtcatcgcggagcggggc
gcggacggtgtgctgcgcaaggcggaggacgtcgagacgtccgtgtacgcgcgctgcctc
gccgaggacatcgtcgtcgacggcaaggtgctggccccggccggcaccgacctgggcgac
gtgctcatcgacgagctggtcaggcacggcgtcgaggaggtcaagacccgctcggtcctg
acctgcgagtccgccgtcggcacctgcgcgatgtgctacggccgttcgctggccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggcacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacg
cagggtctgccgcgtgtcgtcgagctgttcgaggcccgtacgcccaagggtgtcgccccg
atctccgaggcctccggccgcgtccggatcgaggagaccgagaagacgaagaagctcgtc
gtcaccccggacgacggcagcgacgagacggcgttcccgatctccaagcgcgccaaggtc
ctggtccgcgagggcgaccacgtcgaggtcggccagcagctcaccgtgggtgccaccaac
ccgcacgacgtgctgcgcatcctgggtcagcgtgccgtccaggtccacctggtcggcgag
gtccagaaggtgtacaactcgcagggcgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgtgtgacgatcatcgaatccggcgacgccgagctgctgccc
ggcgagctggtcgagcgctcccgcttcgagcaggagaaccgtcgtgtggtccaggagggc
ggtcacccggcctccggtcgtccgcaactgatgggtatcaccaaggcctcgctggcgacg
gagtcctggctgtcggccgcctccttccaggagacgacccgagtcctgacggatgcggcg
atcaacgccaagtccgacagcctcatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggtctgtcccgctaccgcaacatccgggtcgagccgaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggt
accggctccggccaggccgttccgctggaggactacgactacggtccgtacaaccagtaa
DBGET
integrated database retrieval system
