Streptomyces dangxiongensis: D9753_15165
Help
Entry
D9753_15165 CDS
T08044
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sdd
Streptomyces dangxiongensis
Brite
KEGG Orthology (KO) [BR:
sdd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdd03016
]
D9753_15165
Enzymes [BR:
sdd01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
D9753_15165
Transfer RNA biogenesis [BR:
sdd03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
D9753_15165
Prokaryotic type
tRNA splicing ligases
D9753_15165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AYN40039
UniProt:
A0A3G2JHD8
LinkDB
All DBs
Position
complement(3416961..3418154)
Genome browser
AA seq
397 aa
AA seq
DB search
MSYVEIPGARTPIRMWTDPAAVEDVALRQLQNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMQDAVCPAAVGVDIGCGMSAVRTSLTAGDLPGDLSRLRSKIEQAIPVGRGMHEDPVEPG
GFHGLATSGWEDFWGRFDGVADAVHFRRSRAVAQMGTLGSGNHFVEVCVSDDDSVWLMLH
SGSRNIGKELAEHHIGVARQLPHNQGLVDRDLAIFVADTPQMAAYRNDLFWAQEYAKYNR
TLMMALLKDVVRKEFKKARPVFEPEISCHHNYVSEERYDGMDLLVTRKGAIRAGSGEYGI
IPGSMGTGSYIVRGLGNELAFNSASHGAGRRMSRNAAKRRFSAQDLEEQTRGVECRKDSG
VVDEIPAAYKPIEQVIDQQRDLVQVVAKLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtggagataccgggtgctaggacgccgatccggatgtggacggacccggcg
gcggtcgaggacgtggccctgcgccagctccagaacgtggcgaccctgccgtggatcaag
ggtctggccgtgatgccggacgtgcactacggcaagggcgcgacggtcgggtcggtcatc
gcgatgcaggacgcggtgtgcccggcggcggtcggcgtggacatcggctgcggcatgtcc
gcggtgcggacgtcgctcaccgcgggcgacctccccggggacctgtcgcggctgcggtcg
aagatcgagcaggccatcccggtcggacgcgggatgcacgaggacccggtcgagccgggc
ggcttccacgggctggccacgtccgggtgggaggacttctggggccggttcgacggggtc
gcggacgcggtgcacttccgcaggagccgggcggtcgcgcagatggggacgctcggttcg
ggcaaccacttcgtcgaggtctgcgtgagtgacgacgactccgtctggctcatgctccac
tccggctcccgcaacatcggcaaggaactcgccgagcaccacatcggcgtcgcccggcaa
ctcccgcacaaccagggcctcgtcgaccgcgacctcgccatcttcgtggcggacaccccg
cagatggcggcctaccgcaacgacctcttctgggcccaggagtacgccaagtacaaccgc
acgctcatgatggcgctcctgaaggacgtggtccgcaaggagttcaagaaggcccggccg
gtcttcgagccggagatctcctgccaccacaactacgtgtcggaggagcgctacgacggc
atggacctgctcgtgacccgtaagggcgcgatccgggccggctccggcgagtacgggatc
atccccggctcgatgggcacggggtcgtacatcgtgcggggcctcggcaacgagctggcc
ttcaactccgcgtcccacggcgcgggccggcgcatgagccgcaacgcggccaagcggcgc
ttctcggcgcaggacctggaggagcagacccggggcgtggagtgccgcaaggactccggc
gtcgtggacgagatcccggccgcctacaagccgatcgagcaggtcatcgaccagcagcgg
gatctggtccaggtcgtggcgaagctgaagcaggtcgtctgcgtgaagggctga
DBGET
integrated database retrieval system
