Streptomyces dangxiongensis: D9753_27255
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Entry
D9753_27255 CDS
T08044
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sdd
Streptomyces dangxiongensis
Pathway
sdd00040
Pentose and glucuronate interconversions
sdd01100
Metabolic pathways
sdd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sdd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
D9753_27255
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D9753_27255
Enzymes [BR:
sdd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
D9753_27255
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AYN41974
UniProt:
A0A3G2JI37
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Position
6042837..6044174
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AA seq
445 aa
AA seq
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MSTSNCHGRVIATLAGCTALVLSLTGTAAASGPATGHRTGHRTGPERQVLPARDGWASYG
TGTTGGAAADPAHVYTVSTWEQFEAALADGGSTPKIVRVKGTIDADGPGCDSFAVPGYDF
ATYLKTYDPAVWGRTRTLDNEPDDSPEGLRRASAARQDAFVKAAVPANTTIVGIGRDAGF
QGASLQIKGADNVIVRNLAFESPLDCFPQWDPTDTAEGNWNSEYDSAVVHGSAHVWIDHD
TFTDGDHPDSTLPSYYGRIYEQHDGELDIVKGADYVTASWNVFEDHDKTILIGNSDSAAT
AAVDRGHLKVTFHHNLFRNLVERAPRVRFGQVDSYDNHFVAGDGYSYSYGIGMESQLVAE
HNAFTLPDGVLAGSVLKKWKEAPVTAADNWVNGTPVDLIAAHNAQVPGEILRPGAGWTPV
LRTRVDRPQAVPALVGHHAGAGRLR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagtacatccaactgtcatggacgtgtcatagcaacgctggcggggtgcacggccctc
gtgctgtccctcaccggcaccgccgccgcgtccggcccggccaccggccaccgcaccggc
caccgcaccgggccggagcgccaggtcctgcccgcccgggacggctgggcgtcctacggc
accggcaccaccggcggggccgccgccgaccccgcgcacgtgtacaccgtcagcacctgg
gagcagttcgaggccgccctcgccgacggcggcagcacgccgaagatcgtccgcgtgaag
gggacgatcgacgccgacgggccgggctgcgactcgttcgccgtccccggctacgacttc
gccacctatctgaagacctacgacccggcggtctgggggcggacgcgcaccctcgacaac
gagcccgacgacagccccgagggcctgcgccgcgcctccgccgcccgccaggacgccttc
gtcaaggccgccgtccccgccaacacgacgatcgtcggcatcggccgtgacgccggcttc
cagggcgccagcctccagatcaagggcgccgacaacgtcatcgtccgcaacctcgccttc
gagagccccctcgactgcttcccgcagtgggacccgaccgacaccgccgagggcaactgg
aactccgagtacgacagtgccgtcgtccacgggtcggcccatgtgtggatcgaccacgac
accttcaccgacggtgatcaccccgacagcaccctgccgtcctactacggccggatctac
gaacagcacgacggcgagctggacatcgtcaagggcgccgactacgtcaccgcctcctgg
aacgtcttcgaggaccacgacaagacgatcctcatcggcaacagcgacagcgccgccacg
gccgccgtggaccgggggcacctcaaggtcaccttccaccacaacctgttccggaacctg
gtcgagcgggccccgcgcgtccgcttcggacaggtggactcgtacgacaaccacttcgtc
gccggggacggctactcgtacagctacggcatcggcatggagtcccagctcgtcgccgag
cacaacgcgttcaccctgccggacggcgtcctggccgggtcggtgctgaagaagtggaag
gaggcgccggtcaccgccgccgacaactgggtcaacggcacgccggtggacctcatcgcc
gcccacaacgcccaggtgcccggcgagatcctgcggcccggggccggctggactccggtc
ctgcgcacccgggtggaccggccgcaggccgtgcccgcactcgtcggccaccacgcgggc
gccggacgcctgcgctga
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