Streptomyces dangxiongensis: D9753_33420
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Entry
D9753_33420 CDS
T08044
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
sdd
Streptomyces dangxiongensis
Pathway
sdd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sdd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
D9753_33420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdd03400
]
D9753_33420
Enzymes [BR:
sdd01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
D9753_33420
DNA repair and recombination proteins [BR:
sdd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
D9753_33420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID:
AYN44016
UniProt:
A0A3G2JNK1
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All DBs
Position
complement(7422011..7422991)
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AA seq
326 aa
AA seq
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MTLPLIPPMLATPGGLPSAAQDERWAYETKQDGQRVMVYLPGDGSVLLRARSGEDITAAY
PELRPLGAALGATPAVLDGEVLALDEQGRADFQLLQNRMGLAHAPARAARRAARVPVHLV
LFDVPYLAEPLVRLPYVRRRARLEGLGLRGPHWSTPGALTGHGAEALRATREHGLEGLVC
KRLDSVYEPGVRSRAWIKIRNMRAEDVIVGGWLPGRGRLAGLPGAVRAGQRAGGRLRYVG
GVGTGWSAAERAELAELLRDAASGRCPFDPVPRIPDARWVLPQLVGEVSYSTRTRNGMLR
QPSWLRLRPDLTPQESAADLPDSFGR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtgaccctgccgctcatcccgccgatgctcgccacccccggcggcctgccgtccgccgcc
caggacgagcggtgggcgtacgagaccaagcaggacggccagcgggtgatggtctacctg
cccggcgacggcagcgtgctgctgcgcgcccgctccggcgaggacatcaccgcggcctac
cccgaactccggccgctgggcgccgccctgggcgccacgcccgccgtgctggacggcgag
gtgctggccctggacgagcaggggcgggccgacttccagttgctgcagaaccggatgggc
ctggcgcacgcccccgcgcgggcggcgcgccgggccgcccgggtgccggtgcacctggtg
ctgttcgacgtgccgtacctggcggagccgctggtgcggctgccgtacgtccgccggcgg
gcccggctggagggactgggcctgcgcgggccgcactggtcgacaccgggcgccctgacc
gggcacggcgccgaggcactgcgggccacccgggagcacggcctggagggcctggtgtgc
aagcggctcgactcggtgtacgaacccggggtccgttcccgcgcctggatcaagatccgg
aacatgcgcgccgaggacgtgatcgtcggcggctggctgcccggcaggggacggctggcc
gggctgcccggagcggtgcgggccggccagcgcgcgggcggccggctgcggtacgtcggc
ggggtcggcaccggctggagcgcggcggaacgggcggaactcgcggagctgctgcgggac
gcggcgagcgggcggtgccccttcgacccggtgccgcgcatcccggacgcccgctgggtg
ctgccccaactggtgggcgaggtcagctacagcacgcggacccggaacgggatgctgcgc
cagccgtcctggctgcggctgcgcccggacctcaccccgcaggagtcggcggcggacctg
ccggacagcttcggccggtga
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