Saccharophagus degradans: Sde_0070
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Entry
Sde_0070 CDS
T00335
Name
(GenBank) protein of unknown function DUF490
KO
K09800
translocation and assembly module TamB
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_0070
Transporters [BR:
sde02000
]
Other transporters
Pores ion channels [TC:
1
]
Sde_0070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
PG_binding_4
Motif
Other DBs
NCBI-ProteinID:
ABD79334
UniProt:
Q21PP5
LinkDB
All DBs
Position
complement(85323..89135)
Genome browser
AA seq
1270 aa
AA seq
DB search
MSSTPNPEQGEPRANKAPQSRVWKIIKRTLWLALLTICIVLAFVGWVLGTQTGREWALGQ
GVSFFNDLDTGIAVQIEGATSKGLLDWYFEALHVTKNGQPLVDAHKLRLQAELSPLLGKR
IIVNEISSAKLSYTHQAASESPPPEPKEKTELPLAFDWQIELKKLAIDELALALPQAEYL
PRYKVNGKASAFTPSSPLDVTFTAQSLGDEHPKMSLDISSHLVSANTLAIKASIQEAVTN
TQQGLLGALLKLPANQAVDTKLDARITFDEESLQLDLKQLSQQLNSYALNANGKVKTNKN
FTNITLQQLTIATNKKQHTLNAHWNSDKSQITGDVSLDQFPLGILSPWVPGIQSGTLTSD
TTVELTLPKAIDKGEHPLDIQPLLSSIITPNLKANSRSELNATLLSGQQTLPIVAQFNVA
VEKQKVSISSLALKTKNNKQNIDLQAQGNIDVSKQTLNLKVGANAINAQTLHDLLQRFNQ
PLPRDLILNIEKTTATINGSYLNRLENLNIEARTGVNGSYKEQPLTATFTAKGTIKLVSL
QAANAQLGETTLSAKGNIDLLGDKTDLTAQVKNITAPLLKLFNVNLPEELEGNIHLTTHV
QGPLKAPAANVKMGGELSYPLLQLNGNYQRQPIELNLAADWRDKILDIGLLSLQLPNAPT
SEPLLHIEGDINLSSPLPAMNWSLQANQLPAALVAPYGWPDSKGHLTVQLDANTPAAQAF
DFNWLAALHFRGEGHYITQFKQRTSRKKNGQLKTQNIDWQFAFTDGDNTTESNNNTNKTS
NANEQQAGHWKLQSNIIRTQVESADSAAKNIAAEEPATNSQTDWINLTVNTQSLFDSISN
SNQLPNITLSSRLNLGALAFLLERDHKLDGQFNAELALKGSRTNPHIEGELQLADGAYQN
SSQGLNFKNITLQAVADGPNLALSNISIEDTRGGKVTAQGALNWLEPFADNAVQLTIQAH
NMNAIDRKEIEGQINGELQLNGNFEALLLSGDLEVAPLAVSIEGNPGPSIPQIEYSFASE
EIEETKASQSNMAVLSLDLTIRADQQAFIRGRGLEAELAGKIDLNGPVSNITYHGAFKTV
RGHFDIFGKRFKLERGEVGFSNQVATILIIGVYSKKETEIRAEVTGIGDKFTLKLTSIPS
LPEEEILAQLIFGKDRQQITALQAVQLASAVNTLKGGGGGFDPIGSTRDLLGVDTLTVDS
EENEAGDKGVKVGAGKYLSENVYLELERSSDPTHPWQGNILIELTPSISLESTTGGAKGG
SAELLWKRDY
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtacacccaacccagaacaaggcgaaccgcgtgcaaacaaagcgccgcaaagc
cgcgtttggaaaataattaagcgcaccctatggcttgctcttttaactatatgcattgtg
ctggcatttgttggctgggtattgggtacgcaaactggtcgcgaatgggctttgggccaa
ggcgttagcttttttaacgacctagataccggcattgccgtgcaaatagaaggcgcaaca
agcaaggggttattagattggtattttgaagccctgcatgtaaccaaaaatggtcaacca
ttagtagacgcgcacaaactgcgcctacaagccgagctaagcccgctactgggcaaacgc
attattgtaaatgaaatttccagcgcaaagctcagctacacacatcaagccgctagcgaa
agcccaccaccggaacctaaagaaaaaaccgaattaccactcgcgttcgactggcaaatt
gaattaaaaaaactggccatcgatgaactcgccctagcactaccgcaagccgagtatttg
ccgcgctacaaagtaaacggcaaagccagcgcttttacgccaagctccccgctcgacgtg
acctttaccgcgcaaagcttgggagacgaacaccctaaaatgtcgctcgacattagctca
caccttgtaagtgcaaacacactagcaataaaagctagcattcaagaggccgttactaat
acgcaacagggcttactaggcgcgctactaaaattgccggccaatcaagctgtagatacc
aaactagacgcgcgcattacgtttgacgaagaaagcctgcagctcgatttaaaacaattg
agccagcaattaaatagctacgcgctaaacgccaatggcaaagtaaaaaccaataaaaat
ttcaccaatattaccttgcagcaactcaccattgccaccaacaaaaagcagcacacatta
aacgcccattggaatagtgataaatcgcagattaccggcgacgttagtcttgatcagttt
ccattgggtatactttcaccgtgggtacccggcatacaaagtggcaccctcaccagcgac
accactgttgagctaaccctacctaaagcaatagataaaggtgaacaccctttagatatt
caaccgttgcttagcagcattattacccccaacttaaaagccaatagccgcagcgagctt
aacgccaccctattaagcggccaacaaacgctgcctattgttgcgcaatttaatgtagca
gtagaaaagcaaaaagtgagcattagctcgcttgcgctaaaaacaaaaaataacaagcag
aatattgacctacaagcgcagggcaatattgatgtaagcaaacaaacgcttaatttaaaa
gtaggcgcaaacgcaataaatgcacaaacactacacgatttgctgcaacgctttaatcag
cctttaccgcgcgatttaatactaaacatagaaaaaaccaccgccacaattaatggcagc
tatttaaatcgtttagagaatttaaatatagaggcgcgcacaggggttaacggcagttat
aaagagcaacctttaacagctacgtttaccgccaagggcaccattaagcttgtttcgcta
caagccgcaaacgcccaactgggtgaaaccacccttagcgccaagggcaacatagacttg
cttggcgacaaaaccgatttaaccgcccaggtaaaaaatataaccgccccactgcttaag
ctgtttaatgtaaacctacccgaagaactcgaaggcaatattcatctaacaacccatgta
caggggccactaaaagcacccgccgcaaatgtaaaaatgggtggcgagttaagttaccct
ttattacaacttaacggcaactaccaacgccaaccaatcgaattaaatttggcagccgat
tggcgcgacaaaatattagatattggcttgctaagcctacagttacccaatgcgcctaca
tccgagccgcttttacatatagaaggcgatataaacttaagctcgccactgccagctatg
aactggtctttacaagcgaaccaactacccgcagcgctggtagcgccctacggctggcca
gatagcaagggccacctcacagtacagctagatgccaatacacccgccgcccaagcgttc
gattttaattggctagctgctttgcactttagaggtgaagggcattacataacccaattt
aaacagcgcaccagccgcaagaaaaacggccaattaaaaactcaaaatatcgattggcaa
tttgcctttaccgatggcgacaacactacagaaagcaataacaacaccaataaaaccagt
aatgctaacgagcagcaagcaggccactggaagttacaatccaatattattcgcacccaa
gtagaaagcgcagacagcgccgcaaaaaatattgcagcagaagaaccagcaactaacagc
caaaccgactggataaacttaactgttaacacccaatcgctattcgatagcattagcaac
agtaaccagttgccaaacattacgctaagcagccgattaaatttgggcgcactggcgttt
ttacttgagcgcgaccacaagctagatggccagtttaacgcagagcttgccctaaaaggc
tcgcgcactaacccgcatattgagggtgaactacaattagcagatggtgcttatcaaaat
agttcacaaggtttgaactttaaaaacataaccctgcaggccgttgccgatggccctaac
ttagcgctttcaaatataagtatagaagatactcgcggcggcaaagtaaccgcccaaggt
gcattaaactggcttgagccttttgcagacaacgccgtgcagttaacaatacaagcgcac
aacatgaacgcgatagaccgcaaagaaatagaaggccaaattaacggcgaattgcagtta
aacggtaatttcgaagccctacttttaagtggcgacttagaagttgcgccacttgcggta
tccatagaaggcaaccctggtccaagcattccgcaaatcgaatactcgtttgcatcggaa
gaaatagaagaaaccaaagccagccaatccaatatggcggtgctaagcctagatttaact
atacgagccgatcaacaagcgtttatacgcggccgcgggttagaagcagagctagccggt
aaaatagatttaaacggcccagtatctaacattacttaccacggcgcctttaaaacggtg
cgtggtcatttcgatatatttggcaaacgctttaaattagaacgcggtgaagtaggtttt
agcaaccaagtagccaccatattaattattggtgtttacagcaaaaaagaaacagagatt
cgcgccgaagtaacaggcataggcgataagttcaccttaaagctcacctcaataccttcg
ctacccgaagaagaaatattggcacaattaatatttggcaaagaccgccaacaaattacc
gccctacaggcagtgcaattggcatctgcagttaacaccctcaagggtggcggcggcggc
tttgaccctataggcagcacccgcgatttactaggcgtagatacccttaccgtcgattcg
gaagaaaacgaagccggcgataaaggcgtaaaagtgggcgcaggtaaatacctaagcgaa
aatgtatatttagaactagaacgttcaagcgaccccacccacccgtggcagggcaatata
ctaattgaattaacacccagcataagcttagaaagcaccaccggcggcgcgaaaggcggc
tcggcggagcttttatggaagcgtgattattag
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