Saccharophagus degradans: Sde_0071
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Entry
Sde_0071 CDS
T00335
Name
(GenBank) surface antigen (D15)
KO
K07278
translocation and assembly module TamA
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_0071
Transporters [BR:
sde02000
]
Other transporters
Pores ion channels [TC:
1
]
Sde_0071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
ShlB
FapA
POTRA_TamA_1
Motif
Other DBs
NCBI-ProteinID:
ABD79335
UniProt:
Q21PP4
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All DBs
Position
complement(89135..90976)
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AA seq
613 aa
AA seq
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MLFKFKAPVFSSAAFIGYLIYAALLLGSSASAHALGLDIFSNTSSYTLTLNSPESDSARK
ALEEELNSRLKENLRYQPKLKTMPARRRVKEEVEVLEKTLTSMGYYSGEVNYRIFHGQAE
DDNATIEYSVDSGAQYKVSKIAFNFPKHVAKPSNIPLQTGDAVKAQSVLGAQAFIENYIN
DNYCLYEINLSYNVTLHASKAGADIVFTLQQSPDALFGEISFKGQTSIKLDYLTRQAKLE
PGTCFKRKQVDETRLQLLQSNLLVSVDYKYDLNPSYNPDVASKVDITFHLNERHHRTVKT
GLNYSTDGGLGMQVGWEHRNLFGSAENLSLDTGFNEISRFATGRYILPRFIIDNQDLTLR
SHFERETTDAYDSTRAEGSGIVARQLGDHTSAEVGLALTYADIVEAEQSETYNLISIPVG
FTYDYRNSLLNATRGWMFNTSLTPFADISKQDTRFMRWTATTSVYASKTDWAMSPTVALR
VSTGSISGAALNDVPADQRFYVGGGGSVRGYSYQSLGELTESEPDGGKSFGEVSAELRTR
FAGNWGLVLFLDGGYAYASEAPAFGHDFLWGAGLGLRYHTSFAPIRVDFGFPLDKREGID
DSFQLYISIGQAF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
gtgttgtttaaatttaaagcaccagtcttttctagtgctgctttcatcggttatttgata
tacgcggcactcttacttggaagtagcgcttccgcacatgcccttggcctagatattttt
agcaatacttcttcgtacacgcttacgctaaacagcccagaaagcgacagcgcccgcaaa
gcactcgaagaagagctaaacagccgcctaaaagaaaacctgcgctaccagccaaaatta
aaaaccatgccggcaaggcgtcgcgtaaaagaagaagtagaagtattagaaaaaaccctc
acttctatgggctactattctggcgaggttaactaccgtatttttcacggccaagccgaa
gacgataatgccactattgaatacagcgtagattctggcgcgcagtacaaagtaagcaaa
attgcgtttaacttccccaaacatgttgccaaacccagcaatatacctttgcaaacaggt
gacgcagttaaagcgcaatcggtacttggtgcccaggcgtttatagaaaattatataaat
gacaattactgcctgtacgaaataaacctaagctacaacgttactttacacgccagcaag
gcgggggcagatattgtatttaccctgcaacaaagcccagatgccctatttggcgaaatc
agcttcaagggccaaactagcatcaaactcgattatttgacccgccaagccaaactagaa
ccaggtacctgctttaagcgtaaacaggttgatgaaacgcgattgcagctactgcaatct
aatttactggttagcgtagattacaaatacgatctcaaccccagctacaaccccgacgtg
gccagcaaggtagacataacttttcaccttaatgaacggcaccatcgcacggttaaaaca
ggtttaaattacagtaccgacggcggcctgggcatgcaggtgggctgggagcatcgcaat
ttatttggcagtgccgaaaacttatcgttagacactggctttaatgaaatctcgcgcttt
gctaccggccgctatattttgccgcgctttattatcgacaaccaagaccttaccctgcgc
tcacactttgaacgcgaaacaaccgacgcttacgattccacccgtgctgaaggcagcggg
attgtggcgcgtcagttaggcgaccacaccagtgccgaagtgggcttagcgctaacctat
gcagatattgtggaagccgagcaaagcgaaacctataaccttatttctattccggtgggc
tttacctacgactaccgtaatagcttactcaatgccacacgcggctggatgtttaacaca
agcctcacaccgtttgccgatataagcaaacaagacacacgctttatgcgctggacagcc
accaccagcgtatatgcatctaaaaccgactgggcgatgagtccaacggtagcactgcgc
gtttccaccggctctatatcgggcgcggcattaaacgatgtgccagccgaccaacgtttt
tatgtgggcggcggcggctcggtgcgcggctacagttaccaaagtttgggcgagcttacc
gaatccgagccagatggcggtaaatcctttggcgaagtttctgcagagttgcgcactcgc
tttgccggcaattggggcttagtacttttcttagatggcggctatgcctatgccagtgaa
gcacccgcttttggtcacgactttttatggggcgcgggtttaggcttgcgctatcacaca
agctttgcccctattcgtgtggactttggttttccattggataaacgcgaaggtatcgac
gacagtttccagctttatattagtattggacaagcattttga
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