Saccharophagus degradans: Sde_0101
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Entry
Sde_0101 CDS
T00335
Name
(GenBank) transcriptional regulator, BadM/Rrf2 family
KO
K13771
Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sde03000
]
Sde_0101
Transcription factors [BR:
sde03000
]
Prokaryotic type
Helix-turn-helix
Rrf2 family
Sde_0101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrf2
GntR
MarR_2
WHD_MCM8
HTH_6
MCM_WH_arc
DnaD_N
TrmB
Toxin_23
HTH_29
HTH_46
HTH_11
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ABD79365
UniProt:
Q21PL4
LinkDB
All DBs
Position
complement(125617..126057)
Genome browser
AA seq
146 aa
AA seq
DB search
MHITRFTDYSLRVLMYAGLRDGELCTIQEIADSYNISKNHLMKVVQELNIKGYLKAIRGK
NGGLTLGRPANEINLGSLVRDTEQDFNIVECFSEADTCTITPNCKLKSILAQALNAFLGV
LDDYTLEDLLAPRTKAPLMKLLFTDK
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgcatattactcgctttaccgactattccttgcgcgtattaatgtacgccggtttgcgc
gatggcgagttgtgcaccattcaagaaatagctgatagttacaatatatctaaaaaccac
cttatgaaggtggtacaagagctaaatataaaaggctatttaaaagcaatacgcggtaaa
aatggcggccttacccttggtcgccctgccaatgaaattaatttaggcagcttagtacgc
gacacagagcaagattttaatattgtggaatgctttagcgaagcggatacctgcaccatt
accccaaactgcaaattaaaatctatattggcccaagcattaaatgcctttttaggcgtg
ctagacgactacacattagaagatttacttgccccgcgcactaaagcgccgttaatgaaa
cttctgtttaccgataaatag
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