KEGG   Saccharophagus degradans: Sde_0184
Entry
Sde_0184          CDS       T00335                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
sde  Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:sde00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sde03400]
    Sde_0184
Enzymes [BR:sde01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Sde_0184
DNA repair and recombination proteins [BR:sde03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Sde_0184
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1
Other DBs
NCBI-ProteinID: ABD79448
UniProt: Q21PD1
LinkDB
Position
complement(232297..234315)
AA seq 672 aa
MTTLNPRQKEAVHYIDGPSLVLAGAGSGKTSVITRKIAYMIQECGIPARHIAAVTFTNKA
AREMKERVTKLVKGSAARGLTVSTFHNLGLNIIRREHKTLGFKSGFTIFDQEDARGLIKE
IMLKDGDTNTDMIDLVQSQISNWKNGLIEPDEALSKAQSEGEQTWALVFERYNKALKAYN
AVDFDDLIRLPSKLFSEHPEVLNRWQQRIRYLLVDEYQDTNSSQYKVVQQLIGDRGTLTV
VGDDDQSIYAWRGARPENMSLLKVDFPSLHVIKLEQNYRSTARILKAANVLIANNPHEFD
KTLWSDLGMGETIRVIKCPTEDAEAERVATEILTQRLRRQCKFKDFAVLYRGNHQARLME
LKLQHHQIPYNISGGTSFFARAEIKDIMGYLRLIANPADDNAFLRVVNTPRRQIGTGTLE
ALGRYSTERDISLWAACDEMGLQALIPKQGLERIRKFSGWLNSVRSNCHNGDPVQAIREM
IDDIDYEGWLHQNASSPKVAEKRFENVNILVESIKNSLERDENEDADGEERINTAISKLL
LQDMLERQEEEDETDRVQLMTLHASKGLEFPHVFLLGLEEEILPHRNSIEEDNIEEERRL
AYVGITRAQRTLTMTLAGTRKQFGEKQTTTPSRFLDELPPEDVEREGFSEATPEQIEKKG
KETLSSLKGMFD
NT seq 2019 nt   +upstreamnt  +downstreamnt
gtgaccaccctaaaccccagacaaaaagaagccgttcactatattgatggcccaagcctt
gtgcttgctggcgccggctccggtaaaaccagcgttattacccgcaaaattgcctatatg
attcaggaatgcggtattccagcgcgccatatagccgccgtaacctttaccaataaggcg
gcacgagagatgaaagagcgggtaaccaaactggtaaaaggcagcgctgctcgcggctta
acggtttctaccttccacaatttgggcttgaatattattcgccgcgaacacaaaaccttg
gggtttaagtcgggttttaccattttcgaccaagaagacgctcgcggccttattaaagaa
ataatgctaaaagacggcgataccaacaccgatatgatcgacttggtacaaagccaaata
tccaactggaaaaacggccttatcgaacccgacgaagcgctctctaaagcgcaaagcgag
ggcgagcaaacttgggcgctggtttttgaacgctacaacaaggccctaaaagcctacaac
gccgtcgattttgacgatcttatccgcttaccttctaagcttttttcggagcaccccgag
gtgctaaaccgctggcagcagcgcattcgctacctgctggtagacgagtatcaagatacc
aactccagccagtacaaggtggtacagcaacttattggcgatagaggcacacttaccgtg
gtgggcgacgacgatcagtccatctacgcttggcgcggcgcacgaccagaaaatatgtcg
ctactgaaggtggatttccccagcttgcatgtaattaagctcgagcaaaactaccgctcc
acggcgcgcattctaaaggctgcaaacgtgcttattgccaacaacccacacgaattcgac
aaaaccctgtggagtgacctgggcatgggcgaaacaattcgtgtaataaagtgccccact
gaggatgccgaagccgagcgcgttgccaccgaaatacttacccaaaggctgcgtcgccaa
tgcaagtttaaagacttcgccgtactttaccgcggcaaccatcaggcgcgcttgatggag
ctaaaacttcaacaccaccaaataccctacaacataagcggcggcaccagtttttttgcc
cgcgcagagattaaagacataatgggttacctgcgactaatcgccaacccagccgacgac
aacgcttttttacgcgtagtgaacaccccacgccggcaaataggcaccggcacactcgaa
gccttgggccgctactctaccgagcgcgacattagcctgtgggcagcgtgcgacgaaatg
gggttgcaggcgctcatccccaagcagggcttagagcgtattcgcaagttttcgggctgg
ttaaatagcgtgcgcagcaactgccacaacggcgacccagtgcaggctattcgcgaaatg
atagacgatatagattacgagggctggctgcaccaaaacgctagctcgccaaaagttgca
gagaaacgcttcgaaaacgtgaacattctcgtcgaaagtattaaaaacagcctcgaacgt
gacgaaaacgaagacgctgacggagaagagcgcatcaacaccgccatatccaaattattg
ctgcaggatatgctggaaagacaggaagaagaagacgaaaccgatcgtgttcaactaatg
accctgcacgcctcaaagggcttggaattcccccacgtattcttattgggcctagaagaa
gaaattctgccccacagaaacagcatagaagaagacaacatagaagaagagcgccgccta
gcctacgtaggcattacccgcgcccaacgcacactcaccatgacactcgccggtacccgc
aaacaattcggcgaaaaacaaaccaccacccccagccgctttttagacgaactaccaccg
gaagacgtagaaagagaaggctttagcgaagccacaccagaacaaatagaaaagaaaggc
aaagagacactgagctctttgaaggggatgtttgattag

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