Saccharophagus degradans: Sde_0196
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Entry
Sde_0196 CDS
T00335
Name
(GenBank) ATP-dependent endonuclease of the OLD family
KO
K07459
putative ATP-dependent endonuclease of the OLD family
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Sde_0196
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_21
AAA_15
OLD-like_TOPRIM
SMC_N
AAA_23
DUF2813
ABC_tran
AAA_29
AAA_27
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ABD79460
UniProt:
Q21PB9
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All DBs
Position
complement(252334..254334)
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AA seq
666 aa
AA seq
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MKVEQISITNFRCFGRETTTFTLQDNSTVFIGSNGSGKTAAIQALSRLFGVTSKQRQVRK
TDFHIEHDKDELASGSTLSIDVILSFPGHDEPDGADTIPEFFQQMAVETPGGDLKARIIL
KAKWIDDGTPLGSVEEDIRWAPRLTNNFDWEKDCTRVQASERSRIQLIYIPAHRNISEQV
TNLIKSRFWQAAKWSDEFRNHVEALSKNIQASYANEAPAKLLLEKLSSRWKQVHDADTDT
DPRLKLIDSRFERIIQNAGFTFFPNEFGQERDLADLSDGQKSLFHIALTAATLEAELAAI
EMNYEDSPFDHDKMRRVCLTLLAIEEPENSLSPFFLSRIIEQALEIGSLDAAQVLISSHS
ASIISRLEPENVRYFRLDRSNRTSSVQKILLPEDDEEASKFIRLAVKAYPEIYFARCVIL
GEGASEEIVIPRLAEAMGFPLDPSFVPVVPLGGRYCVHFWKLLSDLKIPFVTLLDLDAGR
SHGGAKLVQGTADRLDEMGIDWNSNSVVEDRLLDPDKIDTLEDADIWYDFDDNDWLNVFE
AEGVYFSDPLDIDFAMLLSFPEEYKIPNPGGRGPRNTPESIENAKIATLKTDGDSSLYED
QYDDTFRWYPYLFLNNKSKPETHIKALSKLSKERLSRDAPRELKALVSKVINIVMGSENG
HQNQPL
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagagcaaatatctatcaccaatttccgttgttttggccgggagactacaact
tttacgcttcaggataattctaccgtttttattggctctaatggttcaggaaagacagcg
gcaattcaagcactctctaggttatttggtgttacaagtaagcagcgacaagtgcgaaaa
acagattttcacatcgagcatgataaagacgaacttgcgagtggaagcaccttatctatc
gacgtaatactctcattccctgggcatgatgagcctgacggggctgacacaatacctgag
tttttccagcaaatggccgtggagacgcccggcggagaccttaaagcacgtataatattg
aaggcaaaatggatcgatgacggaacgcctttgggttcagtagaggaagacattcgatgg
gcccctagacttacaaacaattttgactgggaaaaggattgcacgagggtgcaggcttcg
gaaagaagcagaattcagctaatttatattcctgcgcatagaaatatcagcgaacaggtg
accaaccttataaagagtcggttttggcaagcggccaaatggtctgatgagtttcgcaat
cacgtcgaagcactttctaaaaatattcaagctagttatgccaatgaggcccccgcaaaa
ttattgctcgaaaaattatcttcccgctggaagcaagttcacgacgcggatactgacact
gatccacgattgaaattaatcgacagtcggttcgaacgtataatccaaaacgcagggttt
acatttttcccaaacgaatttggtcaagagcgagatctggctgatctaagtgatgggcaa
aaatccttgtttcacatcgcactgaccgccgccacactcgaagcagagctggcagctata
gaaatgaattacgaagacagccccttcgatcatgacaagatgaggagagtatgtttaaca
cttctcgcaattgaggaaccggaaaattcgttatctccattttttctaagtcggattatc
gagcaagcattggaaatcggcagtcttgacgccgctcaggtattgatttcgagtcactct
gcttcaattatttcgagattggagcccgaaaatgttcgctattttcgacttgatagaagc
aatcgtacttcatctgtgcaaaaaatacttctaccggaagacgatgaagaagcatcaaaa
tttattcgactggcagtcaaggcctatccagaaatttattttgctcggtgcgtcatactc
ggtgagggtgcttcagaagaaatcgttattcctcgcctagctgaggctatgggattccca
ctggatccttcctttgtacccgtagttccattaggaggacgctactgtgttcatttttgg
aaactactaagcgatttaaagatccccttcgttactctacttgatctggatgccggacgg
tctcatggcggtgcaaaattagttcaagggaccgccgatcggcttgatgaaatgggcatc
gattggaacagtaattctgtcgtcgaagatagattacttgatcctgataaaattgatact
ctggaagatgcagatatttggtatgactttgatgataacgattggctcaatgtatttgag
gctgaaggtgtttatttttctgatccactggatattgattttgcaatgcttctctcgttt
cctgaagagtacaagattccaaacccgggcgggcgcggaccaaggaacaccccagagtca
attgaaaatgcgaaaatcgcaacgctaaaaacagacggtgacagcagtttgtacgaagac
caatacgacgacaccttcaggtggtatccatacctctttttaaataataaaagtaagcca
gaaactcatataaaagcactttccaaacttagcaaagagagactttctagagatgcacca
agggagcttaaagccttggtatccaaagtaataaatattgtgatgggaagtgaaaatggt
caccagaatcaacccctgtga
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