KEGG   Saccharophagus degradans: Sde_0237
Entry
Sde_0237          CDS       T00335                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
sde  Saccharophagus degradans
Pathway
sde00300  Lysine biosynthesis
sde00470  D-Amino acid metabolism
sde01100  Metabolic pathways
sde01110  Biosynthesis of secondary metabolites
sde01120  Microbial metabolism in diverse environments
sde01230  Biosynthesis of amino acids
Module
sde_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sde00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Sde_0237
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Sde_0237
Enzymes [BR:sde01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     Sde_0237
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: ABD79501
UniProt: Q21P78
LinkDB
Position
complement(296305..297138)
AA seq 277 aa
MRLRFTKMHGLGNDFVMIDAISQRVTITPERARQLADRHFGVGCDQVLVVETPDSPDADF
KYRIFNHDGSEVENCGNGARCFAVFVRQRGLTAKSVITVETAVGRMVLHVQEDDQVTVDM
GAPILSPADIPLAAPQQATSYTLPTQGAGDITIGAVSMGNPHAVYCVNDCKTAPVETLGP
EIEAHPHFPKKVNAGFMQVVSPSEINLRVYERGAGETLACGTGACAAVVAGRLQGLLENT
VKVNLPGGSLSITWEGVDSPVMMTGPATTVFHGQVKI
NT seq 834 nt   +upstreamnt  +downstreamnt
atgcgacttcgctttaccaaaatgcacggcctaggcaacgactttgtaatgatcgatgcc
ataagccagcgcgtcaccattaccccagagcgagcgcgccaactggccgaccgccatttt
ggtgtgggctgcgatcaagtattggttgtagaaacacccgattcccccgacgccgatttt
aaataccgcatttttaatcacgatggcagtgaagtagaaaactgtggcaacggcgcccgc
tgctttgcggtgtttgtgcggcagcgcggactaacggcaaaaagcgttattaccgtagaa
acagccgtgggccgcatggtgttacatgtacaagaagacgatcaagttactgtcgatatg
ggcgcacctattcttagccccgccgatattcccctcgcagcgccgcagcaggcaaccagt
tatacactgccaacgcaaggcgcaggcgatataacaattggtgccgtttctatgggcaac
ccccatgcggtgtactgtgttaacgactgcaaaaccgcgccggtagaaaccctcggccca
gaaatagaagcccaccctcacttccctaaaaaagtgaatgccggctttatgcaggtagtt
agccccagcgaaattaacctgcgcgtatacgagcgcggcgcaggcgaaaccttagcttgc
gggaccggtgcgtgtgccgctgtggttgctgggcgtttgcagggcttgcttgaaaacacc
gtaaaagtaaacctgcctggcggcagcctttctataacgtgggaaggtgtagacagccca
gtaatgatgaccgggcctgccaccacggtatttcatggacaagttaagatatga

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