Saccharophagus degradans: Sde_0237
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Entry
Sde_0237 CDS
T00335
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sde
Saccharophagus degradans
Pathway
sde00300
Lysine biosynthesis
sde00470
D-Amino acid metabolism
sde01100
Metabolic pathways
sde01110
Biosynthesis of secondary metabolites
sde01120
Microbial metabolism in diverse environments
sde01230
Biosynthesis of amino acids
Module
sde_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sde_0237
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sde_0237
Enzymes [BR:
sde01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Sde_0237
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Gene cluster
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ABD79501
UniProt:
Q21P78
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All DBs
Position
complement(296305..297138)
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AA seq
277 aa
AA seq
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MRLRFTKMHGLGNDFVMIDAISQRVTITPERARQLADRHFGVGCDQVLVVETPDSPDADF
KYRIFNHDGSEVENCGNGARCFAVFVRQRGLTAKSVITVETAVGRMVLHVQEDDQVTVDM
GAPILSPADIPLAAPQQATSYTLPTQGAGDITIGAVSMGNPHAVYCVNDCKTAPVETLGP
EIEAHPHFPKKVNAGFMQVVSPSEINLRVYERGAGETLACGTGACAAVVAGRLQGLLENT
VKVNLPGGSLSITWEGVDSPVMMTGPATTVFHGQVKI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttcgctttaccaaaatgcacggcctaggcaacgactttgtaatgatcgatgcc
ataagccagcgcgtcaccattaccccagagcgagcgcgccaactggccgaccgccatttt
ggtgtgggctgcgatcaagtattggttgtagaaacacccgattcccccgacgccgatttt
aaataccgcatttttaatcacgatggcagtgaagtagaaaactgtggcaacggcgcccgc
tgctttgcggtgtttgtgcggcagcgcggactaacggcaaaaagcgttattaccgtagaa
acagccgtgggccgcatggtgttacatgtacaagaagacgatcaagttactgtcgatatg
ggcgcacctattcttagccccgccgatattcccctcgcagcgccgcagcaggcaaccagt
tatacactgccaacgcaaggcgcaggcgatataacaattggtgccgtttctatgggcaac
ccccatgcggtgtactgtgttaacgactgcaaaaccgcgccggtagaaaccctcggccca
gaaatagaagcccaccctcacttccctaaaaaagtgaatgccggctttatgcaggtagtt
agccccagcgaaattaacctgcgcgtatacgagcgcggcgcaggcgaaaccttagcttgc
gggaccggtgcgtgtgccgctgtggttgctgggcgtttgcagggcttgcttgaaaacacc
gtaaaagtaaacctgcctggcggcagcctttctataacgtgggaaggtgtagacagccca
gtaatgatgaccgggcctgccaccacggtatttcatggacaagttaagatatga
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