Saccharophagus degradans: Sde_0266
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Entry
Sde_0266 CDS
T00335
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_0266
Transporters [BR:
sde02000
]
Other transporters
Pores ion channels [TC:
1
]
Sde_0266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
ABD79530
UniProt:
Q21P49
LinkDB
All DBs
Position
complement(332263..333780)
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AA seq
505 aa
AA seq
DB search
MFTKSIKPFKHIYFLAIVLVVAFSLLHNGFLVANSYAQPSQAIAEQISQNDAEPNGKQSA
DSNTTAEEESGNINLSDSIPIDEALEVWEDKFSSILADLGLNNSLHARLAASAAIIVIAL
MLMLVANRITKKVRQRITHLARRVHLSPSKTRFYQRAILWLINFLLVVGAASALAVTWGV
DTDTLANDTVMAALANLLTIYFIVLAGTMIVHIANGLVESLFKRWGSKSQSRTNTLLPIA
RNTVYVTCFVVFTLMLLAELGINVMPLLAGAGVLGFAIGFGAQTLIKDLLMGFIIIFEDL
IQVDDVVTLAGRTGIVERITIRKVQLRDLSGNVYTIPFSEVDIVENKTKDFSYAMLEIGV
AYRENVDDVMAMLIEVDKQLQDDDDFKDILLEPLEMFGLDKFGDSAVVIKARIKTVPLQQ
WNVLREFNRRVKILFDERNVEIPFPHQTIYFGEDKNGTAPPLHLKADSNDKISEHATIEA
KPAQKKTNTDKANQPAPDGDSGEDS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccaaatcgattaagccgtttaaacacatttattttttagccattgtgctggta
gttgcattctcactattacacaatggctttcttgttgccaatagttacgcgcaacccagc
caagctattgcagagcaaatttcgcaaaatgacgcagagccaaacggcaaacaaagcgca
gattccaacactaccgctgaagaagaaagcggaaacattaatttaagcgattccattccc
attgatgaagcattagaagtatgggaggacaagttctctagcatattggccgatctaggc
cttaacaatagcctgcatgcgcgactagcagcaagcgcagccattattgttatcgcttta
atgcttatgctagtcgctaatcgtataaccaaaaaggtacgccagcgcataactcattta
gcaagacgcgtgcatctaagcccctcgaaaacccgattttaccaacgtgcaattttatgg
ttaattaactttttacttgtagttggcgcggctagtgcacttgcggttacctggggtgta
gatacagacacactagctaacgacacagtaatggcagcccttgccaacctgttaaccatc
tattttattgtactcgccggcacaatgattgttcatatagccaatggcttagtggagagt
ctgttcaagcgctggggaagcaaaagtcaatcgcgtacaaatacgcttctgcctatagcg
cgcaatacagtatatgtaacctgctttgttgtttttacgcttatgctacttgcagagcta
ggcataaatgtaatgccgttacttgctggtgccggtgtattaggtttcgccattggtttt
ggtgcgcaaacacttattaaagatttactaatggggtttattattatttttgaagacctt
attcaagtagacgatgtggtaacgctagctggacgcacaggcattgtagagcgcattacc
attcgcaaggttcaactgcgcgatttaagcggtaacgtatataccattccctttagcgaa
gtagatattgttgaaaataaaacgaaagactttagctatgccatgctggagattggcgta
gcctaccgtgaaaacgtagacgatgtaatggccatgctaatagaagtggacaagcagcta
caggacgatgacgactttaaagatattttacttgagccacttgagatgtttggtttagat
aaattcggtgatagcgctgttgtaattaaagcacgtattaagactgtgccattacagcaa
tggaatgtgctacgtgaatttaatcgccgagtaaaaatactgttcgacgaacgcaatgta
gaaataccgttcccccatcaaaccatatactttggcgaggataaaaacggtactgcaccg
ccactgcatttaaaggcggactcaaatgacaaaatatctgagcacgcaaccatagaagct
aagccggcacagaaaaaaaccaatacggacaaagccaatcagcctgcgccagatggcgat
agtggcgaggatagttaa
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