Saccharophagus degradans: Sde_0369
Help
Entry
Sde_0369 CDS
T00335
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sde
Saccharophagus degradans
Pathway
sde00730
Thiamine metabolism
sde01100
Metabolic pathways
sde01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Sde_0369
Enzymes [BR:
sde01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Sde_0369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ABD79633
UniProt:
Q21NU6
LinkDB
All DBs
Position
456219..458135
Genome browser
AA seq
638 aa
AA seq
DB search
MTTDTLEKPRLSDTAQVDSQSIAPFPNSKKIYVQGSRPDIRVPMREINLSITPTEFGGEQ
NPPVRVYDTSGVYTDPNVKIDVRQGLPDVRSAWIAERGDTEVLQQKSSSFTQQRLHDASL
DTLRFNHQRQPLKAKPRANVTQMHYARCGIITPEMEYIAIRENMSWQQAKEQGVLDQQHA
GEHFGANIPDEITPEFVRSEVACGRAIIPANINHPELEPMIIGRNFLVKINGNIGNSAVT
SSIEEEVAKLTWGTRWGADTIMDLSTGKNIHETREWIIRNSSVPIGTVPIYQALEKVDGV
AEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAH
HRENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADANDEAQFGELETLGELTKIAWKH
DVQVMIEGPGHVPMHMIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG
WYGCAMLCYVTPKEHLGLPNKDDVKEGIITYKIAAHAADLAKGHPGAQLRDNALSKARFE
FRWEDQFNLGLDPDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVRDYAAEHGT
DITPIAEDEVVRMIDVEAEMRKKSEEFREKGSEIYGKI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgatacattagaaaaaccacgcttgagtgataccgcacaggtagacagtcaa
tccattgcgccgtttccaaattctaaaaagatctacgtgcagggtagtcgcccagatatt
cgcgtacctatgcgcgaaattaatttatctataacgccaacggaatttggtggcgaacag
aatccacccgtgcgtgtttacgacacttctggtgtgtacaccgaccccaatgtaaaaata
gatgtgcgccaaggtttgcccgatgtgcgcagcgcttggatagccgagcgcggtgacacc
gaagtgctgcaacaaaaaagttcgtcttttacccagcagcgcttacacgatgcaagcttg
gataccttgcgttttaatcaccagcgccagccccttaaagccaagccgcgcgcaaacgta
acgcaaatgcactacgcgcgctgcggcattattaccccagaaatggaatatattgccatt
cgcgaaaatatgagctggcagcaagccaaagagcaaggcgtgttagatcagcagcatgcc
ggcgagcattttggcgcaaacatcccagatgaaattacaccagaatttgtgcgctctgaa
gtggcctgcggccgcgcaattattcctgcaaatattaaccaccccgaactagagccaatg
attattggccgcaactttttagtaaaaattaacggcaatatcggcaacagtgcggttacc
tcatctattgaagaagaagtggcgaagttaacctggggcacgcgctggggtgccgatacc
attatggatctgtccaccggtaaaaatattcacgaaacgcgcgagtggattattcgcaac
tcgtcagtgcccattggtacagtacctatttaccaagctttagaaaaagtagatggcgta
gccgaagatctaacgtgggagattttccgcgataccctcatcgagcaagcagagcaaggg
gttgactacttcacaatccacgccggtgtactgttgcgctatgtgccgcttaccgctaaa
cgggtaacaggtattgtgtcgcgcggcggctcgattatggctaaatggtgcttggcgcat
caccgcgaaaactttttatacacccatttcgaagacatttgcgaaattatgaaagcttac
gatgtgagcttttctttgggggatggcttgcgcccaggctccattgccgacgccaacgac
gaagcgcaattcggcgagctagaaacactgggcgagcttaccaaaattgcgtggaaacac
gatgtgcaggtaatgattgaaggcccaggccacgtaccaatgcacatgatcaaagaaaac
atggataagcaattgcgcgaatgtggtgaagcgccgttttataccttggggccgctgact
accgatatcgccccaggctacgaccatattacctcgggtattggtgcggccatgattggc
tggtacggttgtgccatgctttgttacgttacacccaaagagcatttgggtttacccaac
aaagacgatgtaaaagagggtatcatcacttacaaaattgctgcccacgcagcggatttg
gccaaagggcaccccggcgcacagctgcgtgacaacgcactctctaaggcgcgctttgaa
ttccgttgggaagatcagtttaatttgggcttagacccagatactgcgcggtcttatcac
gacgaaacgctgccaaaagattccgctaaagttgcgcacttttgctctatgtgtggcccc
aagttctgctcgatgaaaatcacccaagaggtgcgcgattacgcagcagaacacggtaca
gatattacaccaatcgccgaagatgaagtggtacgaatgattgatgtagaagccgaaatg
cgcaagaagtcggaggagttccgcgagaagggcagtgagatatatgggaaaatctag
DBGET
integrated database retrieval system
