Saccharophagus degradans: Sde_0406
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Entry
Sde_0406 CDS
T00335
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sde03400
]
Sde_0406
DNA repair and recombination proteins [BR:
sde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sde_0406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
DUF7125
ChlI
Zn_ribbon_LapB
Lon_C
DnaB_C
GvpD_P-loop
RecA_N
AAA_16
SLFN-g3_helicase
ABC_tran
nSTAND_NTPase5
AAA_22
nSTAND3
Rad51
Viral_helicase1
AAA_14
AAA_30
PAXNEB
cobW
AAA_29
AAA
NTPase_1
Zeta_toxin
AAA_24
AAA_5
Zn_ribbon_8
AAA_19
Zn_ribbon_Thio2
Motif
Other DBs
NCBI-ProteinID:
ABD79670
UniProt:
Q21NQ9
LinkDB
All DBs
Position
502403..503767
Genome browser
AA seq
454 aa
AA seq
DB search
MAKQKTGYVCTDCGADYSKWQGQCAECGQWNTVQEVRLGAATSSRSASQAGYAGQGLSKV
TPLAEIDLAELPRIASGMDELDRVLGGGFVPGSVVLIGGNPGAGKSTLLLQTLCHLSQKH
PALYVTGEESLQQVAMRAQRLGLPTDKLQLLSATDVDALLASADQVKPKLMVVDSIQVMH
HADIQSAPGSVSQVRESAAALTRYAKQTGTVLILVGHVTKDGSLAGPKVLEHIIDCSIMI
EGSNDSRFRTLRGSKNRFGAVNELGVFAMTEQGLKEVSNPSAIFLQRSDEVASGSVVMVV
WEGTRPLLVEIQGLVDMSSLGNPRRVAVGLEQNRLAMLLAVLHRHGGIMVGDQDVFVNVV
GGVKIVETSADLALLLALVSSFRDQPLPRDLVVFGEVGLAGEIRPVPSGQERLREAAKHG
FKKAIVPANNVPREPIKGLEIVAVKKLSEALEAI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaagcaaaaaaccggctacgtatgtaccgattgcggcgcagattactccaagtgg
caaggacagtgcgccgaatgtggccagtggaataccgtacaagaagtgcgcttgggcgcg
gctacaagtagtcgcagtgcaagccaagcgggctacgcagggcagggtttatctaaggtt
acgcccctcgccgaaatagatttggccgagttgccgcgtattgccagtggtatggatgaa
ttagaccgcgtactgggtggcggctttgtgcccggctcggtggtgcttattggtggcaac
cctggtgcgggtaaatcaacgctgctactgcaaactctttgtcatttatcgcaaaaacac
cctgcgctatacgtaaccggtgaggaatcgctgcaacaggtggcaatgcgcgcgcagcgt
ttagggttacctaccgacaaactccagcttttatctgccaccgatgtcgatgcactcttg
gccagtgccgaccaagttaaacccaaacttatggtggtggattctattcaggtaatgcat
cacgccgatattcaatctgccccaggcagtgtgtcgcaggtgcgcgaatcagctgcagcg
ctcactcgctacgccaaacaaaccggcacagtgcttattttggtgggacatgtaaccaaa
gatggcagccttgccggcccgaaagtgctcgagcacattatcgattgctccatcatgata
gaaggctctaatgacagtcggtttcgcaccttgcgcggcagtaaaaaccgctttggcgcg
gtgaacgagctgggggtgtttgccatgaccgagcagggcttaaaagaggtgtctaacccg
tcggctattttcttgcagcgctccgacgaagtggcctctggctcggtagtcatggtggtg
tgggaaggcacgcgcccgctgttggtcgaaatacaaggcttggtggatatgtcgagcttg
ggtaacccgcgccgcgttgcggtagggctagagcaaaaccggctggcgatgttactagcg
gtgctgcaccgccacggcggcattatggttggcgatcaagatgtgtttgtaaacgttgtg
ggcggtgtgaaaattgtagaaaccagtgccgacttggcgttgttgttggcgctggtgtcg
agctttagggatcaacccctaccgcgcgacttagtggtatttggcgaagtgggcctagcg
ggggagattcgccccgtgcccagtggccaagagcgcctgcgcgaagcggccaagcacggc
tttaaaaaagcaatcgttcccgccaacaacgtcccgcgcgaacctatcaaggggttggaa
attgtcgcagtcaaaaaactaagcgaagccctagaagccatttag
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