Saccharophagus degradans: Sde_0416
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Entry
Sde_0416 CDS
T00335
Name
(GenBank) ABC transporter related
KO
K06020
energy-dependent translational throttle protein EttA
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sde03016
]
Sde_0416
Transfer RNA biogenesis [BR:
sde03016
]
Prokaryotic type
tRNA transport factors
tRNA export factors
Sde_0416
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
MMR_HSR1
AAA_29
ATP-synt_ab
AAA_23
AAA_22
RsgA_GTPase
ABC_ATPase
AAA_28
NB-ARC
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ABD79680
UniProt:
Q21NP9
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Position
complement(513145..514806)
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AA seq
553 aa
AA seq
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MAQYVFTMNRVGKIVPPKREILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDQDYI
GEARPMPDIKVGYLQQEPQLNPEKDVRGNVLEGMQEAVDALAELDRVYAAYAEPDADFDA
LAKTQARMEDIIQAWDAHNMEHTLEVAADALRLPPWDADVTKLSGGEKRRVALCRLLLSK
PDMLLLDEPTNHLDAESVYWLERFLKDFTGTVVAITHDRYFLDNAAGWILELDRGHGIPY
EGNYSDWLDAKEKRLAQEERGEAARKKAIKAELEWVRQNPKGRQAKSKARLARFEEMQSQ
DFQSRNETNEIYIPPGERLGDKVIEFKGVSKGYGKELLIDNLSFSIPKGAIVGIVGGNGA
GKSTLFRMIAGQEQPDSGTIELGETVKVAFVDQSRDNLDDDKSVWEAVSGGSDILKIGNY
EVGSRAYIGRFNFKGNDQQKRVGDLSGGERGRLHLANTLKQGANVLLLDEPSNDLDIETL
RALEEAIQTFPGSALIISHDRWFLDRVATHILAYEGDSEIVFFEGNYTEYHEDFVARKGE
NAQPRRVKYKSLK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatacgtattcactatgaatcgagtgggaaaaattgttcccccaaaacgcgaa
attcttaaggatatctccctttctttcttccctggcgccaaaattggtgttttaggcttg
aacggtgcgggtaaatcgacgcttttgcgcattatggcaggcgtggatcaggactatatt
ggtgaagcgcgccccatgcccgatattaaagtggggtatttgcagcaggaacctcagctg
aacccagaaaaggacgtgcgcggtaacgtattagaaggcatgcaagaggccgtagatgct
ctggccgaactagaccgcgtttacgccgcttacgccgagccggatgccgactttgacgca
ttggccaaaacccaagcgcgtatggaagacattattcaggcgtgggatgcccacaacatg
gagcacaccctagaagttgccgccgatgcattgcgcctaccgccttgggatgccgatgta
accaaactctctggtggtgaaaagcgccgcgtcgccctgtgtcgcctactgctttctaag
ccagacatgctactgctcgacgagccaaccaaccacttggatgccgaatctgtttactgg
ttagagcgcttcttaaaagactttaccggcacagtggtagccattacccacgatcgctac
tttttggataacgctgcaggctggatattggagctcgaccgcggtcacggtattccctat
gaaggtaactattccgattggctagacgcgaaagaaaagcgcctagcgcaggaagagcgc
ggcgaagctgcgcgtaaaaaagcgataaaagcagaattggaatgggtacgtcaaaaccct
aagggccgccaagccaagagcaaggcacgtttagcgcgttttgaagaaatgcaatcgcag
gatttccaatctcgtaacgaaaccaacgaaatttacattccacccggcgagcgcttgggt
gacaaagtgattgagtttaaaggcgtaagcaaaggctacggcaaagagttacttatcgat
aaccttagcttttcaattcccaagggcgccattgtgggcattgtgggcggtaacggcgcg
ggtaaatccaccctgtttagaatgattgccggccaagagcaacccgatagcggtaccatt
gagctgggcgaaacagtaaaagtggcttttgttgaccaaagtcgcgacaacctagacgac
gataagagcgtgtgggaagcggtttctggtggctctgatattttaaaaataggcaattac
gaagtgggctcgcgcgcgtatatcggtcgctttaactttaaaggtaacgaccagcaaaaa
cgtgtgggtgatttatctggtggtgaacgcggccgcttacatttggccaacaccttaaag
caaggcgcaaacgttttgctactggatgagccatcgaacgatttggatattgaaaccctg
cgcgcactagaagaagccattcaaaccttccccggcagcgcactgattatttcgcatgac
cgctggttcttagatcgcgtagccacccatattttagcttacgaaggcgatagcgaaatt
gtattctttgaaggtaactacaccgaataccacgaagactttgttgcccgcaaaggcgaa
aacgcccaaccgcgcagagtgaaatacaaatcgttgaaataa
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