Saccharophagus degradans: Sde_0417
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Entry
Sde_0417 CDS
T00335
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sde
Saccharophagus degradans
Pathway
sde00260
Glycine, serine and threonine metabolism
sde00460
Cyanoamino acid metabolism
sde00630
Glyoxylate and dicarboxylate metabolism
sde00670
One carbon pool by folate
sde00680
Methane metabolism
sde01100
Metabolic pathways
sde01110
Biosynthesis of secondary metabolites
sde01120
Microbial metabolism in diverse environments
sde01200
Carbon metabolism
sde01230
Biosynthesis of amino acids
sde01240
Biosynthesis of cofactors
sde04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Sde_0417
09102 Energy metabolism
00680 Methane metabolism
Sde_0417
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Sde_0417
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Sde_0417
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Sde_0417
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Sde_0417
Enzymes [BR:
sde01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Sde_0417
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Tissue_fac
Motif
Other DBs
NCBI-ProteinID:
ABD79681
UniProt:
Q21NP8
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All DBs
Position
515130..516392
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AA seq
420 aa
AA seq
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MFDTKQTLDAFDPEIWQSIQDEAQRQEEHIELIASENYTSPMVMEAQGTKLTNKYAEGYP
GKRYYGGCEYVDKAEALAIERAKTLFGADYANVQPHSGSQANSAVYAALCSPGDTVLGMS
LAHGGHLTHGASVSFSGKMYNAVQYGINPDTGLVDYEEIANLAREHKPKMIVAGFSAYSQ
VLDWQKFRDIADEVGAYLMVDMAHVAGLVAAGVYPSPVQIADVTTSTTHKTLRGPRGGII
LAKANPEIEKKLNSAVFPGGQGGPLMHVIAAKAISFKEAMTDEYKAYQKQVVANAKAMAA
TFNERGIKIVSGGTENHLMLVDLIGKEYTGKDADAALGAAYITVNKNAVPNDPRSPFVTS
GLRVGTPAVTTRGFKEKQCIDLTNWICDVLESLENGNSEQVIADVKAKVLAVCAEFPVYK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataccaagcaaacactcgacgcattcgacccagaaatttggcaatccatccaa
gatgaagcccagcgtcaagaagagcatattgagttaattgcttcagaaaactacaccagc
ccaatggtgatggaagcccaaggcaccaagcttactaacaaatatgcagaagggtaccca
ggcaagcgctactacggtggttgtgagtatgtagacaaagccgaagcattggctattgag
cgtgcaaaaaccttgtttggtgcagattacgccaacgtacagccgcactctggttcgcaa
gctaactcggctgtttacgccgcattgtgttcacctggcgataccgtattaggcatgagc
ttggcgcacggtggtcacttaacgcacggtgcttccgttagcttctctggcaaaatgtac
aacgcggtacagtacggcattaacccagatactggtttagtcgattacgaagaaattgct
aacttggcgcgtgagcacaagccaaaaatgattgttgctggtttctcggcctatagccaa
gtactagattggcagaaattccgcgatatcgccgacgaagtaggcgcttacttaatggtt
gatatggctcacgttgctggtcttgttgccgctggtgtatacccatcacctgtgcaaatt
gccgatgtaactacctccactacccacaaaacattacgtggtccacgcggtggtattatc
cttgccaaagccaacccagagatagaaaagaaattaaactctgcggtattccctggcggt
caaggtggcccattgatgcacgtcattgcggctaaagcgattagctttaaagaggccatg
accgacgagtacaaagcgtatcaaaaacaagttgttgctaacgcaaaagccatggctgca
acattcaatgagcgcggcattaaaattgtatctggcggaaccgaaaaccaccttatgttg
gtagacttaatcggtaaagaatacaccggtaaagatgccgatgccgctttgggtgcagcg
tacattaccgtaaacaaaaatgcggtacctaacgacccacgctcaccgtttgtaaccagc
ggtttacgcgttggtaccccggctgtaactacccgtggttttaaagagaagcagtgtata
gaccttactaactggatttgcgacgtactagaaagcttagaaaacggcaattcagagcaa
gtaattgcagatgtaaaagcaaaagtattggctgtttgtgctgagttcccagtttacaaa
taa
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