Saccharophagus degradans: Sde_0474
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Entry
Sde_0474 CDS
T00335
Name
(GenBank) putative exonuclease, RdgC
KO
K03554
recombination associated protein RdgC
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sde03400
]
Sde_0474
DNA repair and recombination proteins [BR:
sde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sde_0474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
DUF3896
Motif
Other DBs
NCBI-ProteinID:
ABD79738
UniProt:
Q21NJ1
LinkDB
All DBs
Position
complement(579212..580129)
Genome browser
AA seq
305 aa
AA seq
DB search
MWFKNLRIYRLTQPFEHSPEQLHDLLAPFEFQPCGKLDPQRGGWVPPLGRHGSEFVHAAN
GYIMVAFKQEEKILPSAVVKDHLEQKVAEISEQEARHVSRKERETLKDEIIFTLLPKAFT
KSNICFAYIDTNEKLLVVNASSAKRAEDLMAALREAVGSFPCVPLNPTQPPPSVMTSWLR
DNTISAGLELGEECELTAPKDGRIIRCKNQDLTADEVLSHINTGMVVNKIAVIWKEGVQL
IIDDQFAFKRLKFEEIIQEKAQSSNADSMAEEFDQEFAIMTVELSQMIKDLVKAFGGIET
LDTNN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcaaaaaccttcgcatttatcgccttacccaacccttcgagcactcccccgag
cagctgcacgatttactcgcgccctttgagtttcaaccctgtggcaagctcgacccacag
cgcggcggctgggtacccccactggggcgccacggcagcgaatttgtgcacgctgctaac
ggctacattatggtggcgtttaagcaggaggaaaaaatactcccaagcgcggtagtgaaa
gatcacctagaacaaaaggtggcagaaataagcgaacaagaagctcgccacgtaagccgt
aaagaacgcgaaacattaaaagacgaaataatttttactctactgcccaaggcatttact
aaatcgaatatttgttttgcgtatatagataccaacgaaaaattgttagtggtgaatgct
tcgtcagctaaacgcgcagaagatttaatggcagcactgcgtgaagcagtaggcagcttc
ccttgtgtgccactcaacccaacgcaaccaccgccctcggtaatgaccagctggctgcgt
gacaacaccataagcgcaggcttagagctaggcgaagaatgcgaacttaccgcccctaaa
gatggccgtattattcgctgcaaaaaccaagacctaaccgcagacgaagtgctaagccac
atcaacacaggtatggttgtaaataaaattgcggttatttggaaagaaggcgtgcaatta
attatcgacgaccaattcgccttcaaacgcttaaaattcgaagaaataatccaagaaaaa
gcccaatccagtaacgccgacagcatggccgaagaattcgaccaagaattcgccattatg
accgtagaactatcgcaaatgattaaagacctagtaaaagcctttggcggaatagaaaca
ctagataccaataattaa
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