Saccharophagus degradans: Sde_0506
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Entry
Sde_0506 CDS
T00335
Name
(GenBank) transcriptional regulator, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sde03000
]
Sde_0506
Transcription factors [BR:
sde03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Sde_0506
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
MtrF
HTH_38
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ABD79770
UniProt:
Q21NF9
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Position
complement(619329..620327)
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AA seq
332 aa
AA seq
DB search
MSNIREVARVAGVSVATVSRALSHPEKVSPASMKKVKQAIEEVNYRPNMLARNFRSAKAY
SIVVLVPDIANPFFSLVIRAIEDQAQKRGYAVLLGDTQDSGAKEKEYIRLVETRLADGII
QLRPHSPDAPTNKALGLPYINLCGTEDTPGPCIRIDNVLASKNMVDYLISLDHKRIGIIT
GLRGNPHTMDRMKGYKQSLAEAGIEFDERLIAEGEYSIWSGVNAANKLCGLDKPPTAIMC
MNDEMAIGAVQSLKSHGYAVPQDISVTGFDDIDYARYCDPPLTTISQPAEDMGKIAVDLL
LRLIEGEELSKEEHVLPYDFIVRKSTDKAKEG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatattagagaagtagcgcgcgttgcaggggtatctgttgcgaccgtatcgcgt
gcactaagccacccagaaaaagtctcgcccgcttccatgaaaaaggttaagcaggctatc
gaagaagtgaactaccgccccaatatgctggcgcgcaactttcgctcagctaaggcctat
tccatagttgtgttagtacccgatatcgccaacccgttcttttcgctggttattcgcgcc
attgaagatcaagcccagaagcgaggctatgctgtactgcttggcgatacacaagattcc
ggcgcaaaagagaaagaatatattcgcctagtagaaacgcgccttgccgacggcattatt
caactgcgcccccattcgccagacgcccccaccaataaagcattaggcctaccctacata
aacctgtgcggcaccgaagacacacctgggccgtgcatacgaatagataacgtattggcc
tcaaagaatatggtggattaccttatttcactagaccacaaacgtattggcataattact
ggcctacgcggcaacccgcacaccatggaccgcatgaaaggctacaagcaaagcttagct
gaggcaggcattgagtttgatgaacgcttaattgccgagggcgaatacagtatttggtct
ggcgtgaatgcggccaacaaattgtgcggcctagacaaaccaccaaccgccattatgtgc
atgaatgacgaaatggccattggcgctgtgcagtcactaaagtcgcacggctacgccgta
ccacaggatatttcagtaacagggtttgacgatattgattacgctcgttactgcgatcca
cccttaaccaccatcagccaacccgctgaagatatgggtaaaattgcggtagacttgcta
ttgcgcttaattgagggtgaagaactatctaaggaagagcacgttttaccttacgatttt
attgtgcgtaaaagcacagacaaagctaaagaaggctaa
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