Saccharophagus degradans: Sde_0526
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Entry
Sde_0526 CDS
T00335
Name
(GenBank) ABC transporter related
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
sde
Saccharophagus degradans
Pathway
sde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sde_0526
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_0526
Transporters [BR:
sde02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Sde_0526
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
MMR_HSR1
AAA_22
RsgA_GTPase
Septin
AAA_16
AAA_29
DUF6249
DUF5906
ATP-synt_ab
AAA_24
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ABD79790
UniProt:
Q21ND9
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All DBs
Position
complement(650063..651889)
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AA seq
608 aa
AA seq
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MFSFFESLIKPFPSEPPQQPPNTLKAFILHYANGTRRFLTALGLFTMLIAILEVSLFNFL
GNLVDNLNNSSPTTYWQTHGRDLLFYGLPVLLGLPLCVFIHSLILHQTLLGNFAMRVRWL
AHRHLLGQSVAFYQNEFAGRMATKVMQTALSVREAIIKLLDVILYVAVFFAGVLTLLATL
DLRLAIPLTVWIIIYVSILKYFLPRLARVSSLQADARSDMTGRIVDTYTNINTVKLFSHS
QREEHYAREGMENFLQTVHPQMRLVTKLSTSVWSLNAVLIFCTTSLSIWLWANNAITTGS
IAIAVGLVLRMYGMSQWIMWEVSGLFENLGTARDGMNTLAVERSVLDSEQAAPIAITKGK
IAYNNVSFHYGKENGVIENFNLTIAPGEKIGLVGRSGAGKSTLVNLLLRFYDIESGSITI
DNQNIATHQQESLRQHIAMVTQDTSLLHRSVRDNLLYGNPTASEEQMLLAAQRAKAHEFI
LELEDGQGRKGYDAHVGERGVKLSGGQRQRIAIARAFLKDAPILVLDEATSALDSEVESA
IQENLNQLMQGKTVIAIAHRLSTIAALDKLVVIDQGNIIEHGTHKELLAANGTYAKLWQH
QSGGFLGE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgttttcattttttgaatcacttattaagccattccccagcgagccgccacagcaaccg
cccaatacgctcaaggcgtttatcttacattacgccaatggcactcggcggtttttaacc
gcgctggggttattcaccatgcttatcgccatacttgaagtgtcgctatttaacttttta
ggcaatttggttgataacttaaacaactcaagcccaacaacctactggcaaacccacggc
cgcgacctactattttatggccttcccgtactactggggctgcctctgtgcgtgtttatt
cactcgctaatattgcatcaaacactgcttggcaactttgccatgcgcgtgcgttggtta
gcccacagacacctactcggccaaagcgtggcgttttaccaaaacgaatttgccgggcgc
atggccaccaaagtaatgcaaacagccctctctgtgcgcgaagccattattaaattgctg
gatgttattttatatgtggcagtgttttttgccggtgtgcttaccctgctggccactctc
gatttgcgcttggctattccgctaaccgtttggattattatttacgtaagcattctaaaa
tattttttaccaaggctcgcgcgcgtgtcgtcgcttcaagccgatgctcgctcagacatg
actgggcgcattgtcgacacctacaccaacattaatactgtaaaactgttttcgcacagc
cagcgcgaagaacactacgcccgcgaaggcatggaaaatttcttacaaacggttcaccct
caaatgcgcctggtaaccaaattaagcaccagtgtttggtcgcttaacgcggtactcatt
ttttgtactacgtcactttctatttggttgtgggctaataacgctattaccactggcagc
attgcaattgccgtgggcttagtactgcgcatgtacggtatgtcgcaatggataatgtgg
gaagtatctgggctgtttgaaaacttaggcaccgcgcgcgacggtatgaacacgctggca
gtagaacgctcagttttagattccgagcaagccgcgcctattgccattaccaaaggcaaa
atagcttacaacaatgtttcgtttcactacggtaaagaaaacggcgtgattgaaaacttt
aacttaaccatcgcacccggtgaaaaaattggtttagttggccggtcaggtgcggggaaa
tcgacactggttaatttgcttttacgcttttacgatatagagagcggcagcattactatc
gataaccaaaatatcgccacacatcaacaggaatctttgcgacagcatattgccatggtt
acacaagacacctctctactacaccgctcggtgcgcgataatttactttacggcaacccc
actgcgagtgaagaacaaatgctgctcgccgcgcagcgagccaaagcacacgaatttatt
ttagagctagaagacggccaaggccgaaagggctacgacgcccatgtgggcgaacgcggg
gtaaaactttcaggcggccaacgtcaacgtatagccattgcgcgagccttcttaaaagat
gcgcctattttggtattagatgaagcgacctcggcattagattctgaagttgaatcggcc
atccaagaaaacctcaatcaactaatgcaaggtaaaacagttattgctattgcccatagg
ctttctaccattgccgcattagataaacttgtggtgatagatcaaggaaatataatcgag
cacggtacgcataaagaattgcttgctgctaacggcacctacgcaaaactttggcaacat
caatctggcggttttttaggggaataa
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