Saccharophagus degradans: Sde_0586
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Entry
Sde_0586 CDS
T00335
Name
(GenBank) OmpA/MotB
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_0586
Transporters [BR:
sde02000
]
Other transporters
Pores ion channels [TC:
1
]
Sde_0586
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OprF
TSP_3
OmpW
DUF748
Motif
Other DBs
NCBI-ProteinID:
ABD79850
UniProt:
Q21N79
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All DBs
Position
724500..725645
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AA seq
381 aa
AA seq
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MTNKLKLASSIAVLVSSLSAGVSFADEGDKSIFVTTGKYFYDNDLSIDDATPLTLGAGYD
FSDKWGGELSYTYLNSEIENSNVDVTTKHLLLDGLYYLGDAKGDWKPYLVSGIGGRNVDV
DGFGDSSSTFVNAGVGIKGLLAENFQVRGDVRALHDLDDSFNDVGVNVGLAYVFGGKAKA
SKPTVKPAATTPAKPMDSDNDGVANTLDACPATPANVKVDAKGCALDSDNDGVADYQDSC
ANTAATHKVDAKGCSLSLTETVAINLSIQFDNNSAVVKESYYAEVKRVADFMNQYANTQV
SVEGYTDDRGSAAYNKQLSQKRADAVKATLVSQFNIDAARVTATGFGEINPIDTNDTAAG
RAANRRVVANVSSEVEKAVTK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataaacttaaattggccagttcaatagccgtattagtgtcgtcgttaagtgca
ggcgttagcttcgccgacgaaggtgataaaagtatatttgtaactacaggaaagtacttt
tacgataacgacttatctattgacgatgcaaccccactcactttaggtgcgggttacgac
ttttctgataagtggggcggagagctttcttacacctacttaaacagtgaaatagaaaat
agcaatgttgatgtaacaactaagcacttgctgttagatggtttgtattacctaggcgac
gcaaaaggcgattggaaaccttatttggtgtcgggtattggcggccgcaatgtggatgta
gacggtttcggcgatagctccagcacatttgtaaatgcgggcgtgggtataaaaggttta
cttgccgaaaactttcaagtgcgtggcgatgtgcgtgccctgcacgacttagatgatagc
tttaacgatgtaggtgtaaatgttggtttggcctatgtgtttggcggtaaagctaaagca
agtaaacctactgtaaagccggcagctacaacaccagccaagcccatggatagtgacaac
gacggcgtagccaatactttggatgcttgcccagcaacgcccgctaatgtgaaagtagat
gcaaaaggctgtgccttagatagcgataacgatggcgtagccgattatcaagatagttgt
gccaatacagcggctacccataaagtagatgccaaaggctgctcactttcattaaccgaa
acagttgccattaatttgagcattcaattcgacaacaatagtgcggttgtaaaagaaagc
tattacgcggaagtaaaacgcgtggcagattttatgaaccaatatgcgaacactcaggtg
agcgtagagggttataccgacgatcgcggtagtgcggcctacaataaacaactttcacaa
aagcgtgcagatgcggtgaaagcgacactagtaagccaattcaatattgatgcagcccgt
gtaactgcgacaggcttcggtgaaataaaccccatcgacaccaacgataccgccgctggc
cgtgccgccaaccgccgtgtggttgctaatgtatcatctgaggttgagaaagcagttact
aagtaa
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