Saccharophagus degradans: Sde_0587
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Entry
Sde_0587 CDS
T00335
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_0587
Transporters [BR:
sde02000
]
Other transporters
Pores ion channels [TC:
1
]
Sde_0587
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABD79851
UniProt:
Q21N78
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Position
726347..729226
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AA seq
959 aa
AA seq
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MKKTYLSHCIAALTATASLTSVNLYAQEQDAALEEVVVTGIRSSILNSVAVKRDADTIVE
VVDAGDLSSLPDASIADSLGRLPGVTTVRDSGQSSQLNIRGMNGDFIQTTLNGREQATTS
SETESLRWMAFDQYPAELITQAAVYKSPKASLVEGGVAATVELKTANPLDAAQDHNFNVK
ARLSYNDAAEDVGADANGNRLSASYMGKFLDETLGVSLGFSHLDQPNSFTKARASADDQL
GYGTDDPDPENGIYRLPAALQFQAGSGKDIRDSYMAAVVWEPSDNLSLSVDYFATKFESE
DIRHGVTVGSLGGGGATLTPLSVNSAGEIEDFAVAITDPHIQRKGGTWIESRTEDQSSNA
DSTAIGVNLEWVIREGSTLSLDFADSSGEKTRKDRLATMHAYEPYTTGDARWSELASQGF
TYESNGDDIPTLELTGDIDLTSLDQMKLGRYEEYPHLYTDDVQSFKVDFVQEVELGFVNS
IETGVRLSERVFDSERGAFLWGSRDGIFNIGDGETESWCDDNLSDPFVECSPIALDGFAS
VGSVEGAPDHLVVSIDGLADEIFGAGNYEGKQIWARDWTFVESGALVEDTKAFYILANIE
TQLGDIPVTGNFGVRHVKTDVKAQGLVYVGNDAGDTIVDDVGNSNSNFVEGEFGPEFSDT
LPSLNLNFELTDSDYVRLAAAKVLGRPPVGQMKGGAGGWFDTTTVDQDGVPTEVPRYNVW
TKGTPYLDPFRATQLDVSYEHYFEDDGAVTVAGFYKKIDTLVQQRNYAPGEIDFIDYGIT
IPDSAPEDTVEGAFNTFENSEGGYIRGIELAGTKTFTSLPGVFGGLGLTASYSYTESETE
VGGGALSGETVSLPGLSENVWSATAFWDIDNFSTHLNVRSRDEYVVNLAIPGSSTPVLAK
PYTTVDIQASYAFDMGLEVVLQANNLTDEPNKQDYGSSSLLGEYSSYGRQFYVGVNYAF
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacctacctgtcgcattgtattgcggcactaaccgccacagcgtcgttgact
agcgttaacctgtacgcacaagaacaggatgcagctttagaggaagtcgttgtaactggc
attcgttcttccattttgaattctgtagcggtaaaacgtgacgcagacacaattgtagaa
gtcgtggatgcgggcgatttgtcttccctgccagatgcttctatcgcagattctcttggt
cgcttacctggtgtaactaccgtgcgcgattcggggcaatcttcacagctaaacatccgc
ggtatgaatggtgatttcattcaaacaacactgaatggccgcgagcaagctactacttcc
tcagaaacagaaagcttacgttggatggcatttgatcagtatccagcggagctaatcact
caagcagcggtttataagtcgcctaaagcatcacttgttgaaggtggtgtagcggcaacc
gttgagttaaaaacagccaatccattagacgcggcgcaagatcacaatttcaatgttaaa
gcccgtctctcttataacgacgctgccgaagatgtaggcgccgatgcaaacggtaatcgt
ctgtcagcttcttatatgggtaagttcttagatgaaactttgggtgttagcttaggtttc
tctcacttagatcaaccgaatagttttaccaaagctcgtgcatcggctgatgatcagctt
gggtatggaacggatgatcctgatcctgaaaacggcatatataggttgcctgcagccctt
caattccaagctggttcaggtaaagatatccgagatagttatatggcagccgttgtttgg
gagccgagcgataacctatccttaagtgtggattattttgcgactaaatttgaatcagaa
gatattcgtcacggtgtgacagtagggagtcttggtggaggtggtgcaacactaactcct
ttaagtgttaactctgcaggtgaaattgaagactttgctgtagcgattaccgacccacat
attcaaagaaagggtgggacttggatagaatctagaacagaagatcaaagttctaacgct
gattcaactgctattggcgttaatcttgagtgggtgatcagagaagggtcgacactaagc
ctcgacttcgctgatagttcgggcgagaaaacgcgtaaagatcgtttggcgaccatgcat
gcgtacgagccatataccactggagatgctcggtggagtgagcttgcaagtcaaggcttt
acttatgagtcgaacggcgatgatattccaactctagagttgactggcgacattgatttg
accagtcttgatcaaatgaaattggggcgctatgaggagtacccacacctttacaccgat
gacgttcagtcatttaaagtggattttgtgcaagaggttgaacttgggtttgtcaattcg
attgagacaggtgttcgattgtccgagcgagttttcgattctgagcgcggagcattcttg
tggggaagccgtgacggtatttttaacatcggagatggtgaaacagaaagttggtgcgac
gataatctttccgacccatttgtagagtgttccccaatagcgttggatggctttgcttct
gtcggttctgtagagggcgctccggaccatttggttgtgagtatcgacgggctggctgat
gaaatctttggcgcgggaaactacgaagggaaacagatatgggctcgcgattggacattt
gttgagtctggggcattagttgaagataccaaagcattctacatattggcgaacatagaa
actcagcttggagatatacctgtgacaggtaactttggtgttcgtcatgttaaaactgat
gtaaaagcgcaagggttagtttatgtcgggaatgatgctggcgacacaattgtagatgat
gttggtaattccaattcaaatttcgttgaaggtgagttcggcccagaattttcggatacg
cttccctcccttaacttaaattttgagctaacggatagcgactatgtacgtttagctgca
gccaaagtattgggtcgccctcctgttggtcaaatgaaaggtggtgccggtggttggttt
gatactaccacggttgatcaagacggagtgcccacagaagtgccgcgctacaacgtctgg
acgaaaggtacgccgtacttggatccgttccgtgccactcagctagatgtttcttatgaa
cactactttgaagatgacggtgctgtaactgtagctggtttctacaagaagatagatacc
ttggttcaacagcgtaactatgctcccggtgaaatagattttatagactatggcattacc
attcctgattcagcaccagaagatactgttgagggtgcattcaatacttttgaaaattct
gaaggtggttacattcgaggtattgaattggcgggaacaaaaacgtttactagtttgcct
ggagtattcggtgggttaggtttgaccgcgagctactcgtatacagagagtgaaacagag
gttggtggaggagcgctttctggagaaacagtcagtctgccagggctttccgaaaatgta
tggagtgctactgcattctgggatattgataacttcagcacacacttaaacgtccggtct
cgggatgagtatgttgtgaatttggccataccaggtagctctacccctgttttggccaag
ccatatacaacggtggatatccaagcatcatacgcgtttgatatgggtttagaggttgta
ctacaagctaacaacttaactgatgagcccaataaacaagactatggctcttctagttta
ctaggcgagtatagctcctacggccgtcagttctacgtgggtgtaaactacgcattctaa
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