Saccharophagus degradans: Sde_0721
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Entry
Sde_0721 CDS
T00335
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_0721
Transporters [BR:
sde02000
]
Other transporters
Pores ion channels [TC:
1
]
Sde_0721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABD79983
UniProt:
Q21MU6
LinkDB
All DBs
Position
932596..934518
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AA seq
640 aa
AA seq
DB search
MSLRLYIAAVVALAACEANAQTKASAQTKATEEIETVLVTGARIEGASAASAEVIDAQTL
TLQNSATALELLRNRVGIDVVQPGGPGGITELFIRGAESNFTVVTVDGVRMNDTTNSRGG
GFDLSTLNPDEIERVEILRGPLSSIYGSDALAGAINIKTKSPRNAAPFSARVEGGNHGYA
RVYGGVAFGGGNNTAASGPAVNLSVAHLDAGEPVPGSSATTESYAAAVDWVDNSERAVDT
TIRKVSRERTGYPSASGGYEFAASDELERAQADDLSVGFSWREQVSNNAKLNLNFTHYKR
DEYVNTPAVDGGVLGSPIPAAVSDSALARTKVVGYSSFTLSPTLQMVAGVSAEKEKGENN
TVYDYGFPLPAEFDLQRDTQSVFAELNYSKPQAIDVFISTRFDSAEQLDKQTDELSSKLA
FSYPLFANGRVGVSWGQAFKLPSFYAVGDSLVGNPELKPETSTTSEAFIEHFYSNGKLRV
SGAVFKSEYKNLIDFDFATFKMVNLDEVDISGVEVETLARLSPNFEVGGHITYTSFDVQS
GEPLDGRPNWRGGVFGEWRSSNWSARLHWAYTGERPSTSTATGQVELAGFNRMDFAVARV
LSKRVTLSMNIDNVFDSAYQDEVGFPSPGLGGRLGVSYSH
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
ttgagcctacgtttatatattgccgctgtggttgcattggccgcatgcgaagcaaatgcg
caaacaaaagcatcagcgcaaacaaaagcaaccgaagaaatagaaaccgtactggtaacg
ggggcgcgcatagaaggtgcaagtgcggctagcgccgaggtaatagatgcgcaaacactc
actttgcaaaacagtgctacagcgttggaattgctgcgcaatcgcgtgggtatagatgta
gtgcaacccggtggcccggggggcataaccgaattatttattcgcggtgccgaatcgaat
tttactgtggtgacggtggatggcgtgcgcatgaatgacacaaccaattcacgcggtggt
ggttttgatttatctacccttaaccccgatgaaattgaacgcgttgaaattttgcgcggg
ccgctctcgtctatttatggctccgatgctttggccggtgctattaacattaaaaccaaa
agcccgcgcaatgccgcgccgtttagcgctcgtgtagaaggcggcaaccatggttatgct
cgcgtgtatggcggtgttgcatttggcggcggcaataatactgccgcaagtggcccggcg
gtgaatctaagcgtggcgcatttagatgctggtgagcctgtacctgggtccagtgcgact
accgaatcttacgctgcggcggtagattgggtggataacagcgagcgcgccgtggatacg
actattcgcaaggtgagccgcgagcgcaccggttatccaagtgccagtggtggttacgaa
tttgccgcaagtgacgagttagagcgtgcgcaagccgatgatttaagtgtggggtttagt
tggcgcgagcaagtaagtaacaacgcaaaattaaacttaaattttacccactataagcgc
gacgaatatgtaaatacacctgcagtagatggcggtgtgctgggttcgcctatacccgcg
gcggtaagtgattctgcacttgcgcgcacaaaagttgtggggtactccagctttacattg
tcgccaacactgcaaatggttgccggtgtaagtgcagagaaagaaaagggcgaaaacaac
accgtatacgattacggctttccgctgccagccgaatttgatttacagcgcgatacgcaa
tctgtttttgccgaattgaattacagtaaaccgcaggcaatagatgtatttataagtacg
cgttttgattctgccgagcaactagataagcaaaccgatgaactctcttcgaagttagcc
tttagctacccgctgtttgctaatggtcgcgtgggtgttagctgggggcaggcctttaaa
ttacctagtttctacgcagtaggtgatagcctagtcggcaaccccgaattaaaacccgaa
acaagcactaccagcgaagcgtttatcgagcatttttatagcaacggtaagttgcgggta
agtggcgcggtgtttaaatcggagtacaaaaacttaatcgattttgattttgctactttt
aagatggttaacctcgatgaagtggacatttctggggttgaggtggaaacgcttgcgcgt
ttatcgccaaattttgaggtgggtggccacataacctacacttcatttgatgtgcaaagt
ggcgagccattagatgggcgacccaattggcgcggtggcgtatttggtgagtggcgcagt
agcaattggtcggcgaggctgcactgggcatacaccggtgagcggccaagtacatctacg
gctacaggccaagtagagctggctggctttaaccgtatggattttgccgtggcgagagtt
ttatctaagcgggtaacactctctatgaatatcgacaacgtattcgattccgcttatcag
gatgaggtggggtttccatcccctggtttaggtgggcgtttaggtgtttcttactcgcac
taa
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