Saccharophagus degradans: Sde_0729
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Entry
Sde_0729 CDS
T00335
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sde03400
]
Sde_0729
Enzymes [BR:
sde01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Sde_0729
DNA repair and recombination proteins [BR:
sde03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Sde_0729
Prokaryotic type
Sde_0729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABD79991
UniProt:
Q21MT8
LinkDB
All DBs
Position
complement(942049..943500)
Genome browser
AA seq
483 aa
AA seq
DB search
MRILLWLSNNLRLSDNPALHAAVDSADANGEVLPAYIKDTANPWPIQGAAAWWLHHSLAA
FTNSIKNKGGVLSLFEGDPATLVPELISQNKIDAVYLSQGFEPYEVQLQANIHKWCKQHN
IECKRFAGHLLLNPDTHLNKQGKPFQVFTPYYKAALATHTIPRAKPIPSNLAKVWAAKKL
PKSVALNKLKLLPNLNWADQFNSQWQPGEEGAHKNLREAIEDKIASYTRDRDFPAVDGTS
LLSAHLRFGEISPRQIWQQVATQMDGEQCAPFLRQLMWRDFSYALLHHWPHIPQQAFKQQ
FEKFPWQKASNKNVAKQLHAWQTGTTGYPIVDAGMRQLWQTGWMHNRVRMIVASFLTKHL
RIHWHEGAKWFWDTLVDADLANNTAGWQWVAGCGADAAPYFRIFNPVLQGEKFDKQGEYI
KTWVPELAALPAKFIHAPWLAPQDILQTAGISLGNNSTYPLPIVDHKYAREAALAAYQQL
KGD
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
ttgcgaatactactctggcttagcaacaacctcaggctcagcgacaaccccgcactacac
gcagcagtggacagtgccgacgctaacggcgaggtgcttcctgcttacataaaagataca
gccaacccttggcccatacagggtgcagcagcttggtggcttcaccacagtcttgcggca
tttacaaacagtataaaaaataaggggggcgtgttatcactatttgagggcgacccggca
acactggtaccagagctaattagccaaaacaaaatagatgccgtatacctaagtcagggc
ttcgagccctacgaagtgcaactgcaggctaatatccataagtggtgcaaacaacacaac
atagaatgcaaacgctttgccggccacttactgcttaacccagacacccatttaaataag
cagggcaaaccgtttcaagtatttaccccttattacaaagccgcattggctacacacacc
ataccgcgcgccaaaccaatacccagcaatttagcgaaagtgtgggcagcaaaaaaatta
cccaaaagcgttgcactaaataagcttaagctactacccaacttaaactgggcagatcaa
tttaatagccaatggcaaccgggcgaagaaggcgcgcacaaaaatttacgcgaagcgata
gaagataaaattgcgagttacacacgcgatcgtgattttcccgctgtagacggcacctcg
ctgctttctgcacacttacgctttggcgaaattagcccgcgtcaaatttggcagcaagtt
gcaacccaaatggatggcgaacagtgcgcaccatttttaaggcagctaatgtggcgcgat
ttcagctacgcattgctccaccactggccccacatacctcagcaggccttcaaacaacaa
tttgaaaagtttccgtggcaaaaagccagcaataaaaatgtagccaaacaattgcacgcg
tggcaaaccggcacaaccggctacccaatagtcgatgccggcatgcgccaactgtggcaa
acaggttggatgcacaaccgcgtacgtatgatagtcgcctcatttttaacaaagcatttg
cgtattcactggcatgaaggcgcaaaatggttttgggataccctggtagatgccgacctc
gccaacaacacagcaggctggcaatgggtagcaggttgcggggccgatgccgcgccctac
ttccgaatatttaaccccgtattacagggcgaaaaatttgataagcaaggcgaatacatt
aaaacctgggtgcccgaattagccgcattaccggcaaagtttattcacgccccctggctt
gccccccaagatattttgcaaacagcgggtatttcacttggcaataacagtacctacccg
ctgccaatagtcgaccacaaatatgctagggaagctgcactggctgcttaccaacagcta
aaaggcgattaa
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