Saccharophagus degradans: Sde_0782
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Entry
Sde_0782 CDS
T00335
Name
(GenBank) ribosomal large subunit pseudouridine synthase F
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sde03009
]
Sde_0782
Enzymes [BR:
sde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
Sde_0782
Ribosome biogenesis [BR:
sde03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sde_0782
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABD80044
UniProt:
Q21MN5
LinkDB
All DBs
Position
complement(1011827..1012801)
Genome browser
AA seq
324 aa
AA seq
DB search
MTFDSAVRLNKFISDSGHCSRREADKLIASDRVKINGLLPELGAVVESGDVVTVDDQPLR
ASAADKTDRIYIAYNKPFGITCTTDQTVKGNIVDAIDHDERIFPIGRLDKPSEGLILLTS
DGDIVNKILRAENAHDKEYIVTVNKNLAPNFAEKMSRGLPILGTITKPCKVRVIGKTTFK
IILTQGLNRQIRRMCDYLGYDVKQLVRTRIMNIELGKLKPGQWRRLTKVELDLLTKATSQ
SSKTAIKGANAKSSASPTATKPRVAKPKVKKEPKDLDKHGRPKNKSTGVKRGAKSKNLTT
GGRTGNKGAGRGNAGRPTAPRGRK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtttgacagtgcagtgagattaaacaagtttattagcgattcaggccactgctca
cgcagagaggcagataagctaatagcgagtgatcgcgtaaaaattaacggcttgctgccc
gagttgggcgctgtggtagaaagtggcgacgtagtaaccgtagacgaccagccccttaga
gccagcgctgccgataaaaccgaccgtatttatattgcttataacaaaccatttggtatt
acctgcacaacagatcaaaccgttaagggcaatattgttgatgccatagaccacgacgag
cgcatattcccaattggccgattagataaaccttctgaagggttaattctgctaaccagt
gacggcgatatagtaaataaaatattgcgtgcagagaacgcacacgataaagaatatatt
gttacggtaaataaaaacctcgcccccaattttgcagagaaaatgtctaggggtttacct
atactgggcactattaccaaaccgtgtaaagtacgcgtaataggtaaaacaacctttaag
attattcttacccaagggcttaaccggcaaattcgacgcatgtgcgactacctagggtac
gacgtaaaacagttggtacgcacgcgcattatgaatatagagctgggcaaattaaagccc
ggtcagtggcgccgccttaccaaggtagaactagacctactaaccaaagccaccagccaa
tccagcaaaaccgccattaaaggtgcgaatgcaaaatcaagcgcaagcccaacggcaaca
aaacctcgggtagcgaaacccaaggtaaaaaaagagccgaaagatttagataaacacggc
cgccctaaaaacaaaagcacgggggtaaaacgcggagctaaaagtaaaaaccttaccacg
ggcggtcgcactggcaacaagggggccggtcgcggcaatgcaggtcgccctaccgcaccg
cgtggacgcaaataa
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